BLASTX nr result

ID: Coptis25_contig00033652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033652
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN57401.1| At1g78850-like protein [Capsella rubella] gi|2245...   110   2e-22
ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glyco...   108   3e-22
gb|ACN57418.1| At1g78850-like protein [Capsella grandiflora] gi|...   108   5e-22
gb|ACN57417.1| At1g78850-like protein [Capsella grandiflora] gi|...   108   5e-22
ref|XP_002317462.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>gb|ACN57401.1| At1g78850-like protein [Capsella rubella]
           gi|224577457|gb|ACN57402.1| At1g78850-like protein
           [Capsella rubella] gi|224577459|gb|ACN57403.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577461|gb|ACN57404.1| At1g78850-like protein
           [Capsella rubella] gi|224577463|gb|ACN57405.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577465|gb|ACN57406.1| At1g78850-like protein
           [Capsella rubella] gi|224577467|gb|ACN57407.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577469|gb|ACN57408.1| At1g78850-like protein
           [Capsella rubella] gi|224577471|gb|ACN57409.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577473|gb|ACN57410.1| At1g78850-like protein
           [Capsella rubella] gi|224577475|gb|ACN57411.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577477|gb|ACN57412.1| At1g78850-like protein
           [Capsella rubella] gi|224577479|gb|ACN57413.1|
           At1g78850-like protein [Capsella rubella]
           gi|224577481|gb|ACN57414.1| At1g78850-like protein
           [Capsella rubella]
          Length = 150

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/97 (54%), Positives = 70/97 (72%)
 Frame = -2

Query: 429 TNTANKGVVDLKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSP 250
           TNTANKGVV +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP
Sbjct: 11  TNTANKGVVGIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLNGRNKLVSRLSP 70

Query: 249 FDNLRKGPYSLVMDGGRMLFYYQSKQSPEQEIYSQMQ 139
             N + GPYSLVM+  +++ YY + ++P+   Y + +
Sbjct: 71  SVN-KNGPYSLVMEAKKLVLYYTTNKTPKPIAYYEYE 106


>ref|XP_003543212.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like
           [Glycine max]
          Length = 435

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/138 (44%), Positives = 88/138 (63%)
 Frame = -2

Query: 429 TNTANKGVVDLKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSP 250
           TNTANKGVV  ++LSNGN+VL+D +G  VWQSFDHPTD+LLVGQ L     +KL SRLS 
Sbjct: 129 TNTANKGVVAFRLLSNGNMVLLDAQGGFVWQSFDHPTDTLLVGQYLRAKGPSKLVSRLSE 188

Query: 249 FDNLRKGPYSLVMDGGRMLFYYQSKQSPEQEIYSQMQNINPESPGNILAKMTLQSEPVEN 70
            +N+  GPYSLV++   +  YY+SK SP+  +Y         S    + + +L++    +
Sbjct: 189 KENV-DGPYSLVLEPKGLALYYKSKNSPKPILYWF------SSDWFTIQRGSLENVTFTS 241

Query: 69  EPYFFILKFNFTSIDSAS 16
           +P  F L F++   +S+S
Sbjct: 242 DPETFELGFDYHVANSSS 259


>gb|ACN57418.1| At1g78850-like protein [Capsella grandiflora]
           gi|224577493|gb|ACN57420.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577495|gb|ACN57421.1|
           At1g78850-like protein [Capsella grandiflora]
           gi|224577501|gb|ACN57424.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577517|gb|ACN57432.1|
           At1g78850-like protein [Capsella grandiflora]
          Length = 150

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/97 (54%), Positives = 69/97 (71%)
 Frame = -2

Query: 429 TNTANKGVVDLKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSP 250
           TNTANKGVV +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP
Sbjct: 11  TNTANKGVVGIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLBGRNKLVSRLSP 70

Query: 249 FDNLRKGPYSLVMDGGRMLFYYQSKQSPEQEIYSQMQ 139
             N   GPYSLVM+  +++ YY + ++P+   Y + +
Sbjct: 71  SVN-XNGPYSLVMEAKKLVLYYTTNKTPKPIAYYEYE 106


>gb|ACN57417.1| At1g78850-like protein [Capsella grandiflora]
           gi|224577491|gb|ACN57419.1| At1g78850-like protein
           [Capsella grandiflora] gi|224577497|gb|ACN57422.1|
           At1g78850-like protein [Capsella grandiflora]
           gi|224577499|gb|ACN57423.1| At1g78850-like protein
           [Capsella grandiflora]
          Length = 150

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/97 (54%), Positives = 69/97 (71%)
 Frame = -2

Query: 429 TNTANKGVVDLKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSP 250
           TNTANKGVV +K+L NGN+V+ D  G  VWQSFD PTD+LLVGQSL    +NKL SRLSP
Sbjct: 11  TNTANKGVVGIKILENGNMVIYDSNGKFVWQSFDSPTDTLLVGQSLKLBGRNKLVSRLSP 70

Query: 249 FDNLRKGPYSLVMDGGRMLFYYQSKQSPEQEIYSQMQ 139
             N   GPYSLVM+  +++ YY + ++P+   Y + +
Sbjct: 71  SVN-XNGPYSLVMEAKKLVLYYTTNKTPKPIXYYEYE 106


>ref|XP_002317462.1| predicted protein [Populus trichocarpa] gi|222860527|gb|EEE98074.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  108 bits (270), Expect = 5e-22
 Identities = 60/124 (48%), Positives = 80/124 (64%), Gaps = 11/124 (8%)
 Frame = -2

Query: 429 TNTANKGVVDLKVLSNGNLVLIDRRGSIVWQSFDHPTDSLLVGQSLLPGDKNKLTSRLSP 250
           TNTANKGV   +VL NGN+VL D +G+ +WQSFD PTD+LLVGQSL  G   +L SR S 
Sbjct: 122 TNTANKGVAGFEVLPNGNMVLHDSKGNFIWQSFDSPTDTLLVGQSLRVGGATRLVSRASQ 181

Query: 249 FDNLRKGPYSLVMDGGRMLFYYQSKQSPEQEIY-------SQMQNI----NPESPGNILA 103
            +N   G YSLVM+  R++ YY+S  SP+Q  Y        ++QN+    NP+S  N  +
Sbjct: 182 KEN-SDGAYSLVMESKRLVMYYKSPNSPKQYFYYTFNTLQDRLQNVTLNCNPDSYDNSAS 240

Query: 102 KMTL 91
           ++TL
Sbjct: 241 EVTL 244


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