BLASTX nr result

ID: Coptis25_contig00033645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033645
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis v...   336   2e-90
ref|XP_003630901.1| Aspartyl-tRNA synthetase [Medicago truncatul...   329   2e-88
ref|XP_003609716.1| Aspartyl-tRNA synthetase [Medicago truncatul...   329   2e-88
ref|XP_003590142.1| Aspartyl-tRNA synthetase [Medicago truncatul...   329   2e-88
ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87

>ref|XP_002271358.1| PREDICTED: aspartyl-tRNA synthetase [Vitis vinifera]
            gi|297736395|emb|CBI25118.3| unnamed protein product
            [Vitis vinifera]
          Length = 657

 Score =  336 bits (862), Expect = 2e-90
 Identities = 163/182 (89%), Positives = 173/182 (95%)
 Frame = -1

Query: 656  GHHTSVNKTLDRLRVFVAHELGLVDHSAHSVLWVTDFPMFEWNSAEQRLEALHHPFTAPN 477
            G H SVNKTLDRLRVF+AHELGLVDHS HS+LWVTDFPMFEWNSAEQRLEALHHPFTAPN
Sbjct: 473  GDHASVNKTLDRLRVFIAHELGLVDHSRHSILWVTDFPMFEWNSAEQRLEALHHPFTAPN 532

Query: 476  PDDMRNLSTARALAYDMVYNGVEIGGGSLRIYKREVQEKVLDIVGITPEQAEEKFGYLLE 297
            P+DM +LS+ARALAYDMVYNGVEIGGGSLRI+KREVQEKVL+IVGI+PEQAE KFGYLLE
Sbjct: 533  PEDMEDLSSARALAYDMVYNGVEIGGGSLRIFKREVQEKVLEIVGISPEQAEAKFGYLLE 592

Query: 296  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTRTAQCALTHAPSEVDEQQLKDL 117
            ALDMGAPPHGGIA+GLDRLVMLLAGANSIRDVIAFPKT TAQCALT  PSEVD QQLKDL
Sbjct: 593  ALDMGAPPHGGIAYGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRTPSEVDPQQLKDL 652

Query: 116  SF 111
            S+
Sbjct: 653  SY 654


>ref|XP_003630901.1| Aspartyl-tRNA synthetase [Medicago truncatula]
            gi|355524923|gb|AET05377.1| Aspartyl-tRNA synthetase
            [Medicago truncatula]
          Length = 670

 Score =  329 bits (844), Expect = 2e-88
 Identities = 156/183 (85%), Positives = 172/183 (93%)
 Frame = -1

Query: 656  GHHTSVNKTLDRLRVFVAHELGLVDHSAHSVLWVTDFPMFEWNSAEQRLEALHHPFTAPN 477
            GHH SVNKTLDRLRV+VAHELGL+DH+ HS+LW+TDFPMFEWN +EQRLEALHHPFTAPN
Sbjct: 487  GHHASVNKTLDRLRVYVAHELGLIDHARHSILWITDFPMFEWNDSEQRLEALHHPFTAPN 546

Query: 476  PDDMRNLSTARALAYDMVYNGVEIGGGSLRIYKREVQEKVLDIVGITPEQAEEKFGYLLE 297
            P+DM NL++ARALAYDMVYNGVEIGGGSLRIYKR++Q+KVL+ VGI+ EQAE KFGYLLE
Sbjct: 547  PEDMNNLASARALAYDMVYNGVEIGGGSLRIYKRDIQQKVLETVGISMEQAEAKFGYLLE 606

Query: 296  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTRTAQCALTHAPSEVDEQQLKDL 117
            ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKT TAQCALT +PSEVD QQLKDL
Sbjct: 607  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRSPSEVDPQQLKDL 666

Query: 116  SFS 108
            S +
Sbjct: 667  SIT 669


>ref|XP_003609716.1| Aspartyl-tRNA synthetase [Medicago truncatula]
            gi|355510771|gb|AES91913.1| Aspartyl-tRNA synthetase
            [Medicago truncatula]
          Length = 657

 Score =  329 bits (844), Expect = 2e-88
 Identities = 156/183 (85%), Positives = 172/183 (93%)
 Frame = -1

Query: 656  GHHTSVNKTLDRLRVFVAHELGLVDHSAHSVLWVTDFPMFEWNSAEQRLEALHHPFTAPN 477
            GHH SVNKTLDRLRV+VAHELGL+DH+ HS+LW+TDFPMFEWN +EQRLEALHHPFTAPN
Sbjct: 474  GHHASVNKTLDRLRVYVAHELGLIDHARHSILWITDFPMFEWNDSEQRLEALHHPFTAPN 533

Query: 476  PDDMRNLSTARALAYDMVYNGVEIGGGSLRIYKREVQEKVLDIVGITPEQAEEKFGYLLE 297
            P+DM NL++ARALAYDMVYNGVEIGGGSLRIYKR++Q+KVL+ VGI+ EQAE KFGYLLE
Sbjct: 534  PEDMNNLASARALAYDMVYNGVEIGGGSLRIYKRDIQQKVLETVGISMEQAEAKFGYLLE 593

Query: 296  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTRTAQCALTHAPSEVDEQQLKDL 117
            ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKT TAQCALT +PSEVD QQLKDL
Sbjct: 594  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRSPSEVDPQQLKDL 653

Query: 116  SFS 108
            S +
Sbjct: 654  SIT 656


>ref|XP_003590142.1| Aspartyl-tRNA synthetase [Medicago truncatula]
            gi|355479190|gb|AES60393.1| Aspartyl-tRNA synthetase
            [Medicago truncatula]
          Length = 737

 Score =  329 bits (844), Expect = 2e-88
 Identities = 156/183 (85%), Positives = 172/183 (93%)
 Frame = -1

Query: 656  GHHTSVNKTLDRLRVFVAHELGLVDHSAHSVLWVTDFPMFEWNSAEQRLEALHHPFTAPN 477
            GHH SVNKTLDRLRV+VAHELGL+DH+ HS+LW+TDFPMFEWN +EQRLEALHHPFTAPN
Sbjct: 554  GHHASVNKTLDRLRVYVAHELGLIDHARHSILWITDFPMFEWNDSEQRLEALHHPFTAPN 613

Query: 476  PDDMRNLSTARALAYDMVYNGVEIGGGSLRIYKREVQEKVLDIVGITPEQAEEKFGYLLE 297
            P+DM NL++ARALAYDMVYNGVEIGGGSLRIYKR++Q+KVL+ VGI+ EQAE KFGYLLE
Sbjct: 614  PEDMNNLASARALAYDMVYNGVEIGGGSLRIYKRDIQQKVLETVGISMEQAEAKFGYLLE 673

Query: 296  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTRTAQCALTHAPSEVDEQQLKDL 117
            ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKT TAQCALT +PSEVD QQLKDL
Sbjct: 674  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTTTAQCALTRSPSEVDPQQLKDL 733

Query: 116  SFS 108
            S +
Sbjct: 734  SIT 736


>ref|XP_002298795.1| predicted protein [Populus trichocarpa] gi|222846053|gb|EEE83600.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  327 bits (837), Expect = 2e-87
 Identities = 157/182 (86%), Positives = 172/182 (94%)
 Frame = -1

Query: 656  GHHTSVNKTLDRLRVFVAHELGLVDHSAHSVLWVTDFPMFEWNSAEQRLEALHHPFTAPN 477
            GHH+SVNKTLDRLR+F+A++LGL D S +S+LWVTDFPMFEWN  EQRLEALHHPFTAPN
Sbjct: 483  GHHSSVNKTLDRLRLFIANQLGLNDPSRYSILWVTDFPMFEWNETEQRLEALHHPFTAPN 542

Query: 476  PDDMRNLSTARALAYDMVYNGVEIGGGSLRIYKREVQEKVLDIVGITPEQAEEKFGYLLE 297
            P+DM++LS+ARALAYDMVYNGVEIGGGSLRIYKRE+Q+KVL+IVGITPEQAE KFGYLLE
Sbjct: 543  PEDMKDLSSARALAYDMVYNGVEIGGGSLRIYKREIQQKVLEIVGITPEQAEAKFGYLLE 602

Query: 296  ALDMGAPPHGGIAFGLDRLVMLLAGANSIRDVIAFPKTRTAQCALTHAPSEVDEQQLKDL 117
            ALDMGAPPHGGIA+GLDRL MLLAGANSIRDVIAFPKT TAQCALT APSEVD QQLKDL
Sbjct: 603  ALDMGAPPHGGIAYGLDRLAMLLAGANSIRDVIAFPKTTTAQCALTRAPSEVDPQQLKDL 662

Query: 116  SF 111
            SF
Sbjct: 663  SF 664


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