BLASTX nr result

ID: Coptis25_contig00033641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033641
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47238.1| unknown [Medicago truncatula]                           65   7e-09
gb|AFK39372.1| unknown [Medicago truncatula]                           65   7e-09
ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago...    65   7e-09
gb|ABR18030.1| unknown [Picea sitchensis]                              64   1e-08
ref|XP_002968500.1| hypothetical protein SELMODRAFT_169825 [Sela...    64   1e-08

>gb|AFK47238.1| unknown [Medicago truncatula]
          Length = 86

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/75 (48%), Positives = 39/75 (52%)
 Frame = +1

Query: 1   LLIAFSWSVIKDTVTTLNLAGYGVAFLGVCYYNXXXXXXXXXXXXXXXPQQTDXXXXXXX 180
           LLIAFSWSVIKDTVT +NL GYG+AFLGV YYN                QQ+D       
Sbjct: 11  LLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQALKASETQKKAQQSDEEAGRLL 70

Query: 181 XXXXXXXXXXKSDSQ 225
                     KSDSQ
Sbjct: 71  EQRDGEGTGRKSDSQ 85


>gb|AFK39372.1| unknown [Medicago truncatula]
          Length = 345

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/75 (48%), Positives = 39/75 (52%)
 Frame = +1

Query: 1   LLIAFSWSVIKDTVTTLNLAGYGVAFLGVCYYNXXXXXXXXXXXXXXXPQQTDXXXXXXX 180
           LLIAFSWSVIKDTVT +NL GYG+AFLGV YYN                QQ+D       
Sbjct: 270 LLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQALKASETQKKAQQSDEEAGRLL 329

Query: 181 XXXXXXXXXXKSDSQ 225
                     KSDSQ
Sbjct: 330 EQRDGEGTGRKSDSQ 344


>ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago truncatula]
           gi|355510370|gb|AES91512.1| Solute carrier family 35
           member C2 [Medicago truncatula]
          Length = 345

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/75 (48%), Positives = 39/75 (52%)
 Frame = +1

Query: 1   LLIAFSWSVIKDTVTTLNLAGYGVAFLGVCYYNXXXXXXXXXXXXXXXPQQTDXXXXXXX 180
           LLIAFSWSVIKDTVT +NL GYG+AFLGV YYN                QQ+D       
Sbjct: 270 LLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQALKASETQKKAQQSDEEAGRLL 329

Query: 181 XXXXXXXXXXKSDSQ 225
                     KSDSQ
Sbjct: 330 EQRDGEGTGRKSDSQ 344


>gb|ABR18030.1| unknown [Picea sitchensis]
          Length = 357

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +1

Query: 1   LLIAFSWSVIKDTVTTLNLAGYGVAFLGVCYYN 99
           LLIAFSWS+IKDTVT +NL GYG+AFLGVCYYN
Sbjct: 279 LLIAFSWSIIKDTVTPVNLLGYGLAFLGVCYYN 311


>ref|XP_002968500.1| hypothetical protein SELMODRAFT_169825 [Selaginella moellendorffii]
           gi|302788428|ref|XP_002975983.1| hypothetical protein
           SELMODRAFT_175437 [Selaginella moellendorffii]
           gi|300156259|gb|EFJ22888.1| hypothetical protein
           SELMODRAFT_175437 [Selaginella moellendorffii]
           gi|300164144|gb|EFJ30754.1| hypothetical protein
           SELMODRAFT_169825 [Selaginella moellendorffii]
          Length = 347

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   LLIAFSWSVIKDTVTTLNLAGYGVAFLGVCYYN 99
           LLIAFSWSVI D VTTLNL GYG+AFLGVCYYN
Sbjct: 271 LLIAFSWSVIMDRVTTLNLVGYGLAFLGVCYYN 303


Top