BLASTX nr result

ID: Coptis25_contig00033631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033631
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|ABK95302.1| unknown [Populus trichocarpa]                          186   2e-45
ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus co...   186   2e-45
ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp....   181   4e-44

>ref|XP_002320936.1| predicted protein [Populus trichocarpa] gi|222861709|gb|EEE99251.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  186 bits (472), Expect = 2e-45
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = -1

Query: 325 YDISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPE 146
           YDISGCY +RPWA SIW++M+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPE
Sbjct: 41  YDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 100

Query: 145 VAWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 2
           VAWVT++GK+DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 101 VAWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 148


>gb|ABK95302.1| unknown [Populus trichocarpa]
          Length = 498

 Score =  186 bits (472), Expect = 2e-45
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = -1

Query: 325 YDISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPE 146
           YDISGCY +RPWA SIW++M+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPE
Sbjct: 42  YDISGCYILRPWAMSIWEIMQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 101

Query: 145 VAWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 2
           VAWVT++GK+DL++PIAIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 102 VAWVTKSGKSDLEIPIAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 149


>ref|XP_002515180.1| prolyl-tRNA synthetase, putative [Ricinus communis]
           gi|223545660|gb|EEF47164.1| prolyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 501

 Score =  186 bits (471), Expect = 2e-45
 Identities = 80/108 (74%), Positives = 96/108 (88%)
 Frame = -1

Query: 325 YDISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPE 146
           YDISGCY +RPWA SIW+VM+ FFDAE++KM I+  +FPLF++   LEKEKDHIEGFAPE
Sbjct: 45  YDISGCYILRPWAMSIWEVMQTFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPE 104

Query: 145 VAWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 2
           VAWVT++GK+DL++PIAIRPTSE  MYP +SKWIRGHRDLPL+LNQWC
Sbjct: 105 VAWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWC 152


>ref|XP_002301553.1| predicted protein [Populus trichocarpa] gi|222843279|gb|EEE80826.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  182 bits (461), Expect = 3e-44
 Identities = 77/108 (71%), Positives = 94/108 (87%)
 Frame = -1

Query: 325 YDISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPE 146
           YDISGCY +RPW+ SIW+ M+ FFD E++KM I+  +FPLF++   L+KEKDHIEGFAPE
Sbjct: 42  YDISGCYILRPWSMSIWETMQAFFDVEIKKMKIKNCYFPLFVSSSVLQKEKDHIEGFAPE 101

Query: 145 VAWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 2
           VAWVT+AGK+DL++P+AIRPTSE  MYP FSKWIRGHRDLPL+LNQWC
Sbjct: 102 VAWVTKAGKSDLEVPVAIRPTSETVMYPYFSKWIRGHRDLPLKLNQWC 149


>ref|XP_002876662.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322500|gb|EFH52921.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  181 bits (460), Expect = 4e-44
 Identities = 76/108 (70%), Positives = 96/108 (88%)
 Frame = -1

Query: 325 YDISGCYTVRPWATSIWKVMRKFFDAELEKMNIEESWFPLFITQRSLEKEKDHIEGFAPE 146
           YDISGCY +RPW+ +IW++M+ FFDAE++KM ++  +FPLF++   LEKEKDHIEGFAPE
Sbjct: 66  YDISGCYILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPAVLEKEKDHIEGFAPE 125

Query: 145 VAWVTRAGKTDLDLPIAIRPTSEAAMYPTFSKWIRGHRDLPLRLNQWC 2
           VAWVT++GK+DL++PIAIRPTSE  MYP +SKWIRGHRDLPL+LNQWC
Sbjct: 126 VAWVTKSGKSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWC 173


Top