BLASTX nr result
ID: Coptis25_contig00033595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033595 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|2... 107 1e-21 ref|XP_002512657.1| pentatricopeptide repeat-containing protein,... 103 1e-20 ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 102 2e-20 ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204... 102 2e-20 >ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1| predicted protein [Populus trichocarpa] Length = 306 Score = 107 bits (267), Expect = 1e-21 Identities = 55/105 (52%), Positives = 72/105 (68%), Gaps = 4/105 (3%) Frame = +3 Query: 3 GPVVKMSLPSYSGNTEYNPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDF 182 GP +KMSLPS+SG TEYNP LLKY+C IECRVR V+ A+VSGP K D E+S + + Sbjct: 193 GPAIKMSLPSFSGRTEYNPNLLKYTCSIECRVRAVQAAKVSGPSSPPKHDTEESQSQLKL 252 Query: 183 PVGELGGNDTRER----SISVLLSKPLVALQFNFLRMQVEAPTLV 305 E + + SISV+LSKP++AL+ + L+MQVEAP +V Sbjct: 253 KTVEPSSRELLDEGQNLSISVMLSKPILALELSCLKMQVEAPVVV 297 >ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|222841187|gb|EEE78734.1| predicted protein [Populus trichocarpa] Length = 292 Score = 107 bits (266), Expect = 1e-21 Identities = 55/101 (54%), Positives = 72/101 (71%) Frame = +3 Query: 3 GPVVKMSLPSYSGNTEYNPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDF 182 GP +KMSLPS+SG TEYNP LLKYSC IECRVR V+ A+VS P + K D E+S Sbjct: 188 GPAIKMSLPSFSGRTEYNPSLLKYSCNIECRVRAVRAAKVSRPSLTSKQDAEES------ 241 Query: 183 PVGELGGNDTRERSISVLLSKPLVALQFNFLRMQVEAPTLV 305 L ++ + +ISV+LSKP++AL+F+ L+MQVEAP +V Sbjct: 242 ----LSEHERQNLTISVMLSKPILALEFSCLKMQVEAPVVV 278 >ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548618|gb|EEF50109.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 837 Score = 103 bits (257), Expect = 1e-20 Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 9/121 (7%) Frame = +3 Query: 3 GPVVKMSLPSYSGNTEYNPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKS-----S 167 GP +KMSLPS+SG TE+NP LLKYSC IECRVR V+ A++S P + K E+S Sbjct: 718 GPAIKMSLPSFSGRTEHNPNLLKYSCNIECRVRAVRPAEISVPFPASKHRTEESLGHHNC 777 Query: 168 NPIDFPVGELGGNDTRERSISVLLSKPLVALQFNFLRMQVEAPTLV--CSPP--RDAIGC 335 D GE+ N + S+SV+LS+P++AL+FN+L+MQVEAP+ V CS R ++G Sbjct: 778 KIADSVTGEILDNG-QNLSLSVMLSRPILALEFNYLKMQVEAPSPVSHCSKSSCRTSLGV 836 Query: 336 S 338 S Sbjct: 837 S 837 >ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101230754 [Cucumis sativus] Length = 289 Score = 102 bits (255), Expect = 2e-20 Identities = 56/101 (55%), Positives = 72/101 (71%) Frame = +3 Query: 3 GPVVKMSLPSYSGNTEYNPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDF 182 GP +KMSLPSYSG+TEY P+LLKYSCQI CRVR VK A VS P + DG+ S+ Sbjct: 181 GPAIKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHIT-- 238 Query: 183 PVGELGGNDTRERSISVLLSKPLVALQFNFLRMQVEAPTLV 305 GE G ++ + SVLLSKP++AL+F+ + MQV+APT+V Sbjct: 239 RTGEYGEHE-QSLCTSVLLSKPILALEFSCMEMQVQAPTVV 278 >ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204328 [Cucumis sativus] Length = 289 Score = 102 bits (255), Expect = 2e-20 Identities = 56/101 (55%), Positives = 72/101 (71%) Frame = +3 Query: 3 GPVVKMSLPSYSGNTEYNPQLLKYSCQIECRVRPVKTAQVSGPIHSDKIDGEKSSNPIDF 182 GP +KMSLPSYSG+TEY P+LLKYSCQI CRVR VK A VS P + DG+ S+ Sbjct: 181 GPAIKMSLPSYSGHTEYTPELLKYSCQIRCRVRAVKPATVSIPALNRAEDGDHHSHIT-- 238 Query: 183 PVGELGGNDTRERSISVLLSKPLVALQFNFLRMQVEAPTLV 305 GE G ++ + SVLLSKP++AL+F+ + MQV+APT+V Sbjct: 239 RTGEYGEHE-QSLCTSVLLSKPILALEFSCMEMQVQAPTVV 278