BLASTX nr result

ID: Coptis25_contig00033583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033583
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319055.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002512243.1| conserved hypothetical protein [Ricinus comm...   141   5e-32
ref|XP_002328510.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003520834.1| PREDICTED: uncharacterized protein LOC100794...   116   2e-24
ref|XP_003556482.1| PREDICTED: uncharacterized protein LOC100815...   111   5e-23

>ref|XP_002319055.1| predicted protein [Populus trichocarpa] gi|222857431|gb|EEE94978.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/96 (70%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
 Frame = -3

Query: 285 MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 106
           MI +CF N ++L+  SQ+PQNL+T IYQTQ+CN+PTYLTLTWSKSL SH+LTI A DSFS
Sbjct: 1   MIPACFSNPSTLSSTSQVPQNLVTCIYQTQLCNSPTYLTLTWSKSLFSHSLTIYAADSFS 60

Query: 105 ITVSLYPSTFSFFKNRSGSKSMNLNHHHY-RIKLFW 1
           IT+SLYPS+FSFF+N+ GSKS+ L HHHY RIKL+W
Sbjct: 61  ITISLYPSSFSFFRNKPGSKSLYLTHHHYQRIKLYW 96


>ref|XP_002512243.1| conserved hypothetical protein [Ricinus communis]
           gi|223548204|gb|EEF49695.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/96 (67%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
 Frame = -3

Query: 285 MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 106
           MI +CF + N+L+  SQ+PQ+LIT IYQTQ CN+PTYLTL+WSK+L SH+LT+ A+DSFS
Sbjct: 2   MIPACFSHPNTLSSASQLPQSLITCIYQTQFCNSPTYLTLSWSKTLFSHSLTVFASDSFS 61

Query: 105 ITVSLYPSTFSFFKNRSGSKSMNLNHHHY-RIKLFW 1
           IT+ LYPSTFSFF+N+ GSKS+ L HHHY RIKL+W
Sbjct: 62  ITIPLYPSTFSFFRNKPGSKSICLTHHHYQRIKLYW 97


>ref|XP_002328510.1| predicted protein [Populus trichocarpa]
           gi|224131326|ref|XP_002328511.1| predicted protein
           [Populus trichocarpa] gi|222838225|gb|EEE76590.1|
           predicted protein [Populus trichocarpa]
           gi|222838226|gb|EEE76591.1| predicted protein [Populus
           trichocarpa]
          Length = 340

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/96 (66%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
 Frame = -3

Query: 285 MISSCFRNKNSLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDSFS 106
           MI +CF N ++L+  SQ+PQNLIT IYQTQ+ N+PTYLTL WSK+L SH+LTI A DSFS
Sbjct: 1   MIPACFSNPSTLSSASQVPQNLITCIYQTQLGNSPTYLTLAWSKTLFSHSLTIYAADSFS 60

Query: 105 ITVSLYPSTFSFFKNRSGSKSMNLNHHHY-RIKLFW 1
           IT+SLYPS FS F+N+ GSKS+ L HHHY +IKL+W
Sbjct: 61  ITISLYPSAFSLFRNKPGSKSIYLTHHHYKKIKLYW 96


>ref|XP_003520834.1| PREDICTED: uncharacterized protein LOC100794933 [Glycine max]
          Length = 305

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
 Frame = -3

Query: 285 MISSCFRNKN------SLTHNSQMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQ 124
           MI+ CF   N      S + +SQ+PQNLIT IY+TQ+CN+PTYLTL+WSK+L SH+LTI 
Sbjct: 1   MIAGCFSQPNTPSSSSSSSSSSQVPQNLITCIYKTQLCNSPTYLTLSWSKTLFSHSLTIS 60

Query: 123 ATDSFSITVSLYPSTFSFFKNRSGSKSMNLNHHHYRIKLFW 1
           ATD FSIT+SL  STFSFF+ R GSKS+N      +IKL W
Sbjct: 61  ATDIFSITISLNSSTFSFFRRRQGSKSINKR----KIKLHW 97


>ref|XP_003556482.1| PREDICTED: uncharacterized protein LOC100815054 [Glycine max]
          Length = 331

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 5/100 (5%)
 Frame = -3

Query: 285 MISSCFRNKNSLTHNS--QMPQNLITSIYQTQICNTPTYLTLTWSKSLLSHTLTIQATDS 112
           MI +CF   N+ + +S  Q+PQNL+T IYQTQ+CN+ T+LTLTWS++LLSH+LTI A  +
Sbjct: 1   MIPACFSQPNTPSSSSTTQVPQNLVTCIYQTQLCNSSTHLTLTWSRTLLSHSLTIYAPHT 60

Query: 111 FSITVSLYPSTFSFFKNRSGSKSMNL---NHHHYRIKLFW 1
           FSIT+ L PSTFSFF+ R GSKS+ L   N    +IKL W
Sbjct: 61  FSITIPLNPSTFSFFRTRPGSKSIYLTRPNKRSQKIKLHW 100


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