BLASTX nr result
ID: Coptis25_contig00033581
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033581 (279 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36035.3| unnamed protein product [Vitis vinifera] 140 1e-31 ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [... 140 1e-31 ref|XP_003627060.1| DNA repair protein radA-like protein [Medica... 139 2e-31 ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-31 ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [... 137 1e-30 >emb|CBI36035.3| unnamed protein product [Vitis vinifera] Length = 583 Score = 140 bits (353), Expect = 1e-31 Identities = 71/91 (78%), Positives = 81/91 (89%) Frame = +2 Query: 2 QALCLSDSSVARQFNGVQHNRAEMIIAVLIKQAGLKLQNNAIFVNVVSGVKLQETAGDLA 181 QALCLS S+VARQ NGV +RA+MIIAVL+KQAGLKLQ+N IF+NVVSGV L ETAGDLA Sbjct: 438 QALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAGDLA 497 Query: 182 IAAAVCSSFLDVPIPNDVAFIGEIGLAGELR 274 +AAA+CSSFL+ PIPN +AFIGEIGL GELR Sbjct: 498 VAAAICSSFLEFPIPNGIAFIGEIGLGGELR 528 >ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera] Length = 624 Score = 140 bits (353), Expect = 1e-31 Identities = 71/91 (78%), Positives = 81/91 (89%) Frame = +2 Query: 2 QALCLSDSSVARQFNGVQHNRAEMIIAVLIKQAGLKLQNNAIFVNVVSGVKLQETAGDLA 181 QALCLS S+VARQ NGV +RA+MIIAVL+KQAGLKLQ+N IF+NVVSGV L ETAGDLA Sbjct: 479 QALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGVTLAETAGDLA 538 Query: 182 IAAAVCSSFLDVPIPNDVAFIGEIGLAGELR 274 +AAA+CSSFL+ PIPN +AFIGEIGL GELR Sbjct: 539 VAAAICSSFLEFPIPNGIAFIGEIGLGGELR 569 >ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula] gi|355521082|gb|AET01536.1| DNA repair protein radA-like protein [Medicago truncatula] Length = 643 Score = 139 bits (350), Expect = 2e-31 Identities = 68/91 (74%), Positives = 83/91 (91%) Frame = +2 Query: 2 QALCLSDSSVARQFNGVQHNRAEMIIAVLIKQAGLKLQNNAIFVNVVSGVKLQETAGDLA 181 QALCLS S+ +RQFNG+Q NRA+MII+VLIKQAGL+LQ +A+F+NVVSG+ + ETAGDLA Sbjct: 409 QALCLSGSTGSRQFNGIQANRADMIISVLIKQAGLRLQEHAVFLNVVSGLTVTETAGDLA 468 Query: 182 IAAAVCSSFLDVPIPNDVAFIGEIGLAGELR 274 IAAA+CSS L++PIPND+AFIGEIGL GELR Sbjct: 469 IAAAICSSCLELPIPNDIAFIGEIGLGGELR 499 >ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1| predicted protein [Populus trichocarpa] Length = 525 Score = 139 bits (349), Expect = 3e-31 Identities = 69/91 (75%), Positives = 81/91 (89%) Frame = +2 Query: 2 QALCLSDSSVARQFNGVQHNRAEMIIAVLIKQAGLKLQNNAIFVNVVSGVKLQETAGDLA 181 QALC+S SSV+R NG+Q +RA+MII+VLIKQAGL LQ NAIF+NVVSGV L ETAGD+A Sbjct: 379 QALCVSGSSVSRHINGIQSSRADMIISVLIKQAGLMLQENAIFLNVVSGVMLTETAGDVA 438 Query: 182 IAAAVCSSFLDVPIPNDVAFIGEIGLAGELR 274 IAAA+CSSFL+ PIPN++AFIGEIGL GELR Sbjct: 439 IAAAICSSFLEFPIPNNIAFIGEIGLGGELR 469 >ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max] Length = 560 Score = 137 bits (344), Expect = 1e-30 Identities = 67/91 (73%), Positives = 81/91 (89%) Frame = +2 Query: 2 QALCLSDSSVARQFNGVQHNRAEMIIAVLIKQAGLKLQNNAIFVNVVSGVKLQETAGDLA 181 QALCLS S+ +RQ NG+Q RA+MII+VLIKQAGL+LQ +A+F+NVVSG+ L ETAGDLA Sbjct: 410 QALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGLALTETAGDLA 469 Query: 182 IAAAVCSSFLDVPIPNDVAFIGEIGLAGELR 274 IAAA+CSS L++PIPND+AFIGEIGL GELR Sbjct: 470 IAAAICSSCLEIPIPNDIAFIGEIGLGGELR 500