BLASTX nr result

ID: Coptis25_contig00033576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033576
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable rec...   135   4e-30
ref|XP_004140603.1| PREDICTED: probable receptor protein kinase ...   135   4e-30
ref|XP_003624333.1| Receptor-like kinase [Medicago truncatula] g...   129   2e-28
ref|XP_003601704.1| Receptor-like kinase [Medicago truncatula] g...   127   1e-27
ref|XP_002319620.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable receptor protein kinase
           TMK1-like [Cucumis sativus]
          Length = 930

 Score =  135 bits (339), Expect = 4e-30
 Identities = 69/137 (50%), Positives = 88/137 (64%)
 Frame = +2

Query: 2   WKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXXXXXXXXXXXXXXXXXXHFSGPL 181
           W + T  C+ W  +RCDSSSRVTSI+L+S+SL G                      +GP+
Sbjct: 44  WSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLPSDLNSLSQLTSLSLQRNSLTGPI 102

Query: 182 PSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSLNINLSPWVFPQDLIQSEGLV 361
           PSFANLS LQ L+LD+NNF+SV    F GLT+LQ LSL+ N+NL+PW  P DL Q+  LV
Sbjct: 103 PSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLSLTQNVNLAPWSIPTDLTQASSLV 162

Query: 362 NLSASNVNMMGSLPDIF 412
           +L A N N++GSLPD F
Sbjct: 163 SLYAGNANIVGSLPDFF 179


>ref|XP_004140603.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis
           sativus]
          Length = 930

 Score =  135 bits (339), Expect = 4e-30
 Identities = 69/137 (50%), Positives = 88/137 (64%)
 Frame = +2

Query: 2   WKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXXXXXXXXXXXXXXXXXXHFSGPL 181
           W + T  C+ W  +RCDSSSRVTSI+L+S+SL G                      +GP+
Sbjct: 44  WSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLPSDLNSLSQLTSLSLQRNSLTGPI 102

Query: 182 PSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSLNINLSPWVFPQDLIQSEGLV 361
           PSFANLS LQ L+LD+NNF+SV    F GLT+LQ LSL+ N+NL+PW  P DL Q+  LV
Sbjct: 103 PSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLSLTQNVNLAPWSIPTDLTQASSLV 162

Query: 362 NLSASNVNMMGSLPDIF 412
           +L A N N++GSLPD F
Sbjct: 163 SLYAGNANIVGSLPDFF 179


>ref|XP_003624333.1| Receptor-like kinase [Medicago truncatula]
           gi|355499348|gb|AES80551.1| Receptor-like kinase
           [Medicago truncatula]
          Length = 875

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/137 (48%), Positives = 81/137 (59%)
 Frame = +2

Query: 2   WKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXXXXXXXXXXXXXXXXXXHFSGPL 181
           W   +N C  W+GV+CD + RVTSIDLSS+SL G+                     SG L
Sbjct: 45  WSISSNFCT-WNGVKCDQAHRVTSIDLSSKSLNGTLPSDLNSLSQLTSLFLQSNSLSGAL 103

Query: 182 PSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSLNINLSPWVFPQDLIQSEGLV 361
           PS ANL+ LQ + L  NNF SVP  CF GLT LQ LS+S N +L+PW FP DL +S  LV
Sbjct: 104 PSLANLALLQTVSLGQNNFLSVPVGCFKGLTDLQTLSMSFNNDLAPWTFPTDLAESSSLV 163

Query: 362 NLSASNVNMMGSLPDIF 412
           +L     N+ GSLPDIF
Sbjct: 164 SLDLGGTNLEGSLPDIF 180


>ref|XP_003601704.1| Receptor-like kinase [Medicago truncatula]
           gi|355490752|gb|AES71955.1| Receptor-like kinase
           [Medicago truncatula]
          Length = 933

 Score =  127 bits (318), Expect = 1e-27
 Identities = 65/135 (48%), Positives = 83/135 (61%)
 Frame = +2

Query: 8   AGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXXXXXXXXXXXXXXXXXXHFSGPLPS 187
           +G + C+ W+GV+CD S RVTS++L+S+SL G+                     +G LPS
Sbjct: 51  SGNSFCS-WNGVKCDGSDRVTSLNLASKSLTGTLPSDLNSLSQLTTLSLQSNSLTGALPS 109

Query: 188 FANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSLNINLSPWVFPQDLIQSEGLVNL 367
            ANL+ LQ +FL  NNFTS+P  CF GLT+LQ LSL+ NINL PW  P D  QS  LV L
Sbjct: 110 LANLTMLQTVFLGGNNFTSIPDGCFVGLTSLQKLSLTENINLKPWKLPMDFTQSSNLVEL 169

Query: 368 SASNVNMMGSLPDIF 412
                N++GSLPDIF
Sbjct: 170 DLGQTNLIGSLPDIF 184


>ref|XP_002319620.1| predicted protein [Populus trichocarpa] gi|222857996|gb|EEE95543.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/137 (48%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
 Frame = +2

Query: 5   KAGTNPCNGWSGVRCDSS-SRVTSIDLSSQSLQGSXXXXXXXXXXXXXXXXXXXHFSGPL 181
           K+ T  C+ W G+ CDSS SRVTSI LS  SL G+                     SG L
Sbjct: 44  KSSTTFCS-WHGINCDSSKSRVTSISLSKLSLSGTLPPEISTLSELQSLSVQGNQLSGDL 102

Query: 182 PSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSLNINLSPWVFPQDLIQSEGLV 361
           PS ANL+NLQ +FLDSNNFTS+P   F GLT LQ  S+  N+NLSPW  P DL Q   L 
Sbjct: 103 PSLANLTNLQYIFLDSNNFTSIPPGFFQGLTGLQTFSIGNNVNLSPWQLPTDLAQCTSLT 162

Query: 362 NLSASNVNMMGSLPDIF 412
            L+A++  + GS+PD+F
Sbjct: 163 TLTANDCQLFGSIPDVF 179


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