BLASTX nr result

ID: Coptis25_contig00033575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033575
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   194   2e-47
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   152   9e-35
ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   152   9e-35
ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   140   4e-31
emb|CBI32066.3| unnamed protein product [Vitis vinifera]              139   5e-31

>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 601

 Score =  194 bits (493), Expect = 2e-47
 Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 2/205 (0%)
 Frame = -3

Query: 623 LCPVRVEDWVLFPDHXXXXXXXXXXXXXLNLHGGLDCIYRQGWTNSSFEFGDSGKLVALP 444
           L P+RVED VLFPDH             +     L+C+Y +           + KL+  P
Sbjct: 82  LLPLRVEDRVLFPDHVLLMVSHINDRSEV-----LECVYCK-----DIGVEAANKLIVRP 131

Query: 443 VLSVDEYNELQSIARCPLPPSNYSAMVQLRKRVIRRK--DGVNNLVLVNQTVHSWEMLVY 270
           VLSVDE +EL+ +ARCPLPP NYSA V LR+   +    DG   L  V+ TVHSWEM+ Y
Sbjct: 132 VLSVDELDELRWVARCPLPPQNYSAEVNLRRPPRKESIVDGDEWLRRVHPTVHSWEMMAY 191

Query: 269 AAALDGETAVVFVKGLNLRPDRVSDPAQFSCHFDWNDSEKSGKYALNTNAVTAAQEIIRC 90
           AAALD ++AVVFVKGLNLRPDR SDP QFSCHF   D E+ GK+AL T A +AAQE+IRC
Sbjct: 192 AAALDRDSAVVFVKGLNLRPDRESDPRQFSCHFGTGDRERGGKFALTTRAFSAAQEVIRC 251

Query: 89  SLPLSLKKYPTMAHGLGVSISIASH 15
           SLP S++  P+ AHG+ V++ + SH
Sbjct: 252 SLPRSIRMNPSKAHGIRVTVGLNSH 276


>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  152 bits (383), Expect = 9e-35
 Identities = 91/201 (45%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
 Frame = -3

Query: 617 PVRVEDWVLFPDHXXXXXXXXXXXXXLNLHGGLDCIYRQGWTNSSFEFGDSGKLVALPVL 438
           P+++E  VLFPDH                   LDC+Y +     S   G   + +   VL
Sbjct: 87  PLKIESRVLFPDHLLLMVSGEFGRDEK-----LDCLYHK-----SVARGSDRETLKQSVL 136

Query: 437 SVDEYNELQSIARCPLPPSNYSAM-VQLRKRVIRRKDGVNNLVLVNQTVHSWEMLVYAAA 261
           S D+Y+E +SIARCPLPP NYSA  V LR+  +   D  + LV     V SWE +VY AA
Sbjct: 137 STDKYDEFRSIARCPLPPLNYSASAVDLRRGGVEADD--HWLVRNRHPVASWERVVYEAA 194

Query: 260 LDGETAVVFVKGLNLRPDRVSDPAQFSCHFDWNDSEKSGKYALNTNAVTAAQEIIRCSLP 81
           +DG T VVF KGLNLRP R S+PA+FSCHF   +S  +G+Y   T AV AAQEIIRCSLP
Sbjct: 195 IDGNTVVVFAKGLNLRPHRESNPAEFSCHFRLGNSNNNGEYVHTTKAVAAAQEIIRCSLP 254

Query: 80  LSLKKYPTMAHGLGVSISIAS 18
            S+        G+ V++S  S
Sbjct: 255 ASVPSSLDKEKGIRVTVSRGS 275


>ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  152 bits (383), Expect = 9e-35
 Identities = 91/201 (45%), Positives = 115/201 (57%), Gaps = 1/201 (0%)
 Frame = -3

Query: 617 PVRVEDWVLFPDHXXXXXXXXXXXXXLNLHGGLDCIYRQGWTNSSFEFGDSGKLVALPVL 438
           P+++E  VLFPDH                   LDC+Y +     S   G   + +   VL
Sbjct: 87  PLKIESRVLFPDHLLLMVSGEFGRDEK-----LDCLYHK-----SVARGSDRETLKQSVL 136

Query: 437 SVDEYNELQSIARCPLPPSNYSAM-VQLRKRVIRRKDGVNNLVLVNQTVHSWEMLVYAAA 261
           S D+Y+E +SIARCPLPP NYSA  V LR+  +   D  + LV     V SWE +VY AA
Sbjct: 137 STDKYDEFRSIARCPLPPLNYSASAVDLRRGGVEADD--HWLVRNRHPVASWERVVYEAA 194

Query: 260 LDGETAVVFVKGLNLRPDRVSDPAQFSCHFDWNDSEKSGKYALNTNAVTAAQEIIRCSLP 81
           +DG T VVF KGLNLRP R S+PA+FSCHF   +S  +G+Y   T AV AAQEIIRCSLP
Sbjct: 195 IDGNTVVVFAKGLNLRPHRESNPAEFSCHFRLGNSNNNGEYVHTTKAVAAAQEIIRCSLP 254

Query: 80  LSLKKYPTMAHGLGVSISIAS 18
            S+        G+ V++S  S
Sbjct: 255 ASVPSSLDKEKGIRVTVSRGS 275


>ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  140 bits (352), Expect = 4e-31
 Identities = 85/199 (42%), Positives = 110/199 (55%), Gaps = 9/199 (4%)
 Frame = -3

Query: 596 VLFPDHXXXXXXXXXXXXXLNLHGGLDCIYRQGWTNSSFEFGDSGKLVAL--PVLSVDEY 423
           +LFPDH               LH  L+C+Y     N+S        L     PVLS D Y
Sbjct: 89  ILFPDHHLLILTNPQQQQQ-KLHE-LECVYYTLHPNASSSGSPEPVLEVQVRPVLSTDRY 146

Query: 422 NELQSIARCPLPPSNYSA-----MVQLRKR--VIRRKDGVNNLVLVNQTVHSWEMLVYAA 264
           +E +SI RCPLP +N SA      V LR+R  V RR  G+    L+NQT  SW+ + Y A
Sbjct: 147 DESRSIVRCPLPQTNSSAGGGPKAVDLRRRGEVGRRSLGI----LMNQTAQSWDRVAYEA 202

Query: 263 ALDGETAVVFVKGLNLRPDRVSDPAQFSCHFDWNDSEKSGKYALNTNAVTAAQEIIRCSL 84
            LDG+T VVFVKGLNLRP ++SDP +  CHF      K   + L T AV+ AQE++RC L
Sbjct: 203 TLDGDTVVVFVKGLNLRPHKISDPTRIRCHFGLKSFHKDNAFLLTTRAVSVAQEVVRCML 262

Query: 83  PLSLKKYPTMAHGLGVSIS 27
           P S++  P  A G+ V++S
Sbjct: 263 PQSIRNDPDKARGIRVTVS 281


>emb|CBI32066.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  139 bits (351), Expect = 5e-31
 Identities = 80/153 (52%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
 Frame = -3

Query: 623 LCPVRVEDWVLFPDHXXXXXXXXXXXXXLNLHGGLDCIYRQGWTNSSFEFGDSGKLVALP 444
           L P+RVED VLFPDH             +     L+C+Y +           + KL+  P
Sbjct: 82  LLPLRVEDRVLFPDHVLLMVSHINDRSEV-----LECVYCK-----DIGVEAANKLIVRP 131

Query: 443 VLSVDEYNELQSIARCPLPPSNYSAMVQLRKRVIRRK--DGVNNLVLVNQTVHSWEMLVY 270
           VLSVDE +EL+ +ARCPLPP NYSA V LR+   +    DG   L  V+ TVHSWEM+ Y
Sbjct: 132 VLSVDELDELRWVARCPLPPQNYSAEVNLRRPPRKESIVDGDEWLRRVHPTVHSWEMMAY 191

Query: 269 AAALDGETAVVFVKGLNLRPDRVSDPAQFSCHF 171
           AAALD ++AVVFVKGLNLRPDR SDP QFSCHF
Sbjct: 192 AAALDRDSAVVFVKGLNLRPDRESDPRQFSCHF 224


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