BLASTX nr result
ID: Coptis25_contig00033570
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033570 (463 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811... 64 3e-11 ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777... 62 1e-09 gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr... 60 3e-08 gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 59 7e-08 dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 59 7e-08 >ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max] Length = 1441 Score = 63.5 bits (153), Expect(2) = 3e-11 Identities = 33/104 (31%), Positives = 58/104 (55%) Frame = -1 Query: 463 LETKVKMEKFPSIMNIVCPGWDVLNNYSSDEHGRVWLNWDMSILSITKEVESVQFYPLQG 284 +ET+VK + I + + + L+NY ++GR+W+ WD S + + S Q+ + Sbjct: 375 IETRVKNKNAKKIRDKLKLPHNYLDNYKWHDNGRLWIEWDNSKIDVRHVKCSSQYVHVGV 434 Query: 283 NSGQFGFQFLLTVVYASNRRQDRLVLWEEIKMMSFSINGPWCMM 152 + Q F+F LT VYA N+ R VLW++++ + GPWC++ Sbjct: 435 YNLQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQGPWCVI 478 Score = 29.3 bits (64), Expect(2) = 3e-11 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -3 Query: 170 WTVVYDEDLNNVLFSHECIGDSAVHPRETTPLASCLNVVGLYGHTSTGCVYTWNS 6 W V+ D NNV + + IG AV E L + + L +TG YTW + Sbjct: 475 WCVI--GDFNNVTKAQDRIGGKAVTESEYIDLLNMMETTCLAEMDTTGEFYTWTN 527 >ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max] Length = 1324 Score = 62.0 bits (149), Expect(2) = 1e-09 Identities = 33/102 (32%), Positives = 56/102 (54%) Frame = -1 Query: 457 TKVKMEKFPSIMNIVCPGWDVLNNYSSDEHGRVWLNWDMSILSITKEVESVQFYPLQGNS 278 TKVK + I + + + L+NY ++GR+W+ WD S + + S Q+ + + Sbjct: 317 TKVKNKNAKKIRDKLKLPHNYLDNYKWHDNGRLWIEWDNSKIDVRHVKCSSQYVHVGVYN 376 Query: 277 GQFGFQFLLTVVYASNRRQDRLVLWEEIKMMSFSINGPWCMM 152 Q F+F LT VYA N+ R VLW++++ + GPWC++ Sbjct: 377 LQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQGPWCVI 418 Score = 25.4 bits (54), Expect(2) = 1e-09 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -3 Query: 170 WTVVYDEDLNNVLFSHECIGDSAVHPRETTPLASCLNVVGLYGHTSTG 27 W V+ D NNV + + IG AV E L + + GL +TG Sbjct: 415 WCVI--GDFNNVTKAQDRIGGKAVTESEYIDLLNMMETTGLAEMDTTG 460 >gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 814 Score = 60.5 bits (145), Expect(2) = 3e-08 Identities = 29/90 (32%), Positives = 48/90 (53%) Frame = -1 Query: 463 LETKVKMEKFPSIMNIVCPGWDVLNNYSSDEHGRVWLNWDMSILSITKEVESVQFYPLQG 284 +ET++K +KF I +++ W VLNNY S +GR+W++W+ ++L + S Q + Sbjct: 552 VETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEV 611 Query: 283 NSGQFGFQFLLTVVYASNRRQDRLVLWEEI 194 ++ F VYA N + R LW I Sbjct: 612 DNLTSSECFNFVAVYAFNTLEQRKELWNFI 641 Score = 21.9 bits (45), Expect(2) = 3e-08 Identities = 14/46 (30%), Positives = 18/46 (39%) Frame = -3 Query: 149 DLNNVLFSHECIGDSAVHPRETTPLASCLNVVGLYGHTSTGCVYTW 12 D NNVL + + V E + CL L + G YTW Sbjct: 657 DFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDYYTW 702 >gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] Length = 1161 Score = 58.5 bits (140), Expect(2) = 7e-08 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = -1 Query: 463 LETKVKMEKFPSIMNIVCPGWDVLNNYSSDEHGRVWLNWDMSI-LSITKEVESVQFYPLQ 287 LET V E S++ PGW + +NY E GR+W+ WD SI + + K + + F ++ Sbjct: 78 LETHVAQENANSVLASTLPGWRMDSNYCCSELGRIWIVWDPSISVLVFKRTDQIMFCSIK 137 Query: 286 GNSGQFGFQFLLTVVYASNRRQDRLVLWEEIKMMS----FSINGPWCMM 152 S F + VY N DR LWE+I ++S S+ PW ++ Sbjct: 138 IPS--LLQSFAVAFVYGRNSELDRRSLWEDILVLSRTSPLSVT-PWLLL 183 Score = 22.7 bits (47), Expect(2) = 7e-08 Identities = 14/55 (25%), Positives = 22/55 (40%) Frame = -3 Query: 170 WTVVYDEDLNNVLFSHECIGDSAVHPRETTPLASCLNVVGLYGHTSTGCVYTWNS 6 W ++ D + H I S ++ R L CL L S G +TW++ Sbjct: 180 WLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSN 234 >dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 910 Score = 58.5 bits (140), Expect(2) = 7e-08 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Frame = -1 Query: 463 LETKVKMEKFPSIMNIVCPGWDVLNNYSSDEHGRVWLNWDMSI-LSITKEVESVQFYPLQ 287 LET V E S++ PGW + +NY E GR+W+ WD SI + + K + + F ++ Sbjct: 35 LETHVAQENANSVLASTLPGWRMDSNYCCSELGRIWIVWDPSISVLVFKRTDQIMFCSIK 94 Query: 286 GNSGQFGFQFLLTVVYASNRRQDRLVLWEEIKMMS----FSINGPWCMM 152 S F + VY N DR LWE+I ++S S+ PW ++ Sbjct: 95 IPS--LLQSFAVAFVYGRNSELDRRSLWEDILVLSRTSPLSVT-PWLLL 140 Score = 22.7 bits (47), Expect(2) = 7e-08 Identities = 14/55 (25%), Positives = 22/55 (40%) Frame = -3 Query: 170 WTVVYDEDLNNVLFSHECIGDSAVHPRETTPLASCLNVVGLYGHTSTGCVYTWNS 6 W ++ D + H I S ++ R L CL L S G +TW++ Sbjct: 137 WLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFFTWSN 191