BLASTX nr result
ID: Coptis25_contig00033560
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00033560
(873 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259... 192 3e-62
emb|CBI23880.3| unnamed protein product [Vitis vinifera] 192 3e-62
ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|... 180 4e-57
ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287... 180 4e-57
ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab... 176 6e-55
>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
Length = 2197
Score = 192 bits (489), Expect(2) = 3e-62
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 11/217 (5%)
Frame = -3
Query: 871 QVKIVEILLRNIYATDD--LEKARTLIKKGRLVMTHGIKGLSKCIKCLSEAISILEQPTK 698
Q+KI ILL++++ T D L+K+R LI+KG+ + G +GL CI C SEAIS +
Sbjct: 761 QMKIFNILLQDVFITKDSCLQKSRILIRKGKALRACGTEGLKDCIHCFSEAISTINDMYG 820
Query: 697 QSSSKS----HQLAMAYCLRALCNQEVQPDSKVIMEDIGYALKLWSSINW-----SVDAH 545
++ S+ HQLA++YCLRALC QE +P SK +++DI AL LW SI+ + D H
Sbjct: 821 ETCSRDIPVCHQLAVSYCLRALCIQEAEPTSKRVLQDIHAALNLWLSIHIPECSSTADQH 880
Query: 544 SELETGNAIQLLYCTADLLSMKGWFHFQYDLYKLIIIFLKRKGVPFEKCLAMLWANRRLT 365
+L + N + LLY DLLS+KG+ F D+YKLII K K VP EKCLA+LW RR+
Sbjct: 881 -DLLSKNTMLLLYNIVDLLSLKGYTKFHLDIYKLIIRLFKWKNVPLEKCLAILWEYRRIN 939
Query: 364 HALCTTPIHEDVVSSFAQHFDDRSNTVGFWISCIKDS 254
HALCT+PI+E + +F +H + S + FWISCIK S
Sbjct: 940 HALCTSPINEAFIMTFTEHCGENSKVIDFWISCIKGS 976
Score = 72.8 bits (177), Expect(2) = 3e-62
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = -1
Query: 255 QSLTVGFRQKFSLFDSILPPDGHSNPGSPLGSNVTVDEVKEAALALISGNKTNSN--FLA 82
Q L VGF Q FS + LP G + S ++T+DEVK+ A LIS +S+ FLA
Sbjct: 977 QPLLVGFLQIFSFLFANLP-QGSCHYKSSFRVDITIDEVKDTAEKLISRVPVSSHSVFLA 1035
Query: 81 GYLYHDLCERLFSSGHLIEALSFGRES 1
GYLY+DLCERL S+G LIEALSF +++
Sbjct: 1036 GYLYYDLCERLTSNGRLIEALSFAKQA 1062
>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
Length = 2158
Score = 192 bits (489), Expect(2) = 3e-62
Identities = 103/217 (47%), Positives = 141/217 (64%), Gaps = 11/217 (5%)
Frame = -3
Query: 871 QVKIVEILLRNIYATDD--LEKARTLIKKGRLVMTHGIKGLSKCIKCLSEAISILEQPTK 698
Q+KI ILL++++ T D L+K+R LI+KG+ + G +GL CI C SEAIS +
Sbjct: 708 QMKIFNILLQDVFITKDSCLQKSRILIRKGKALRACGTEGLKDCIHCFSEAISTINDMYG 767
Query: 697 QSSSKS----HQLAMAYCLRALCNQEVQPDSKVIMEDIGYALKLWSSINW-----SVDAH 545
++ S+ HQLA++YCLRALC QE +P SK +++DI AL LW SI+ + D H
Sbjct: 768 ETCSRDIPVCHQLAVSYCLRALCIQEAEPTSKRVLQDIHAALNLWLSIHIPECSSTADQH 827
Query: 544 SELETGNAIQLLYCTADLLSMKGWFHFQYDLYKLIIIFLKRKGVPFEKCLAMLWANRRLT 365
+L + N + LLY DLLS+KG+ F D+YKLII K K VP EKCLA+LW RR+
Sbjct: 828 -DLLSKNTMLLLYNIVDLLSLKGYTKFHLDIYKLIIRLFKWKNVPLEKCLAILWEYRRIN 886
Query: 364 HALCTTPIHEDVVSSFAQHFDDRSNTVGFWISCIKDS 254
HALCT+PI+E + +F +H + S + FWISCIK S
Sbjct: 887 HALCTSPINEAFIMTFTEHCGENSKVIDFWISCIKGS 923
Score = 72.8 bits (177), Expect(2) = 3e-62
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = -1
Query: 255 QSLTVGFRQKFSLFDSILPPDGHSNPGSPLGSNVTVDEVKEAALALISGNKTNSN--FLA 82
Q L VGF Q FS + LP G + S ++T+DEVK+ A LIS +S+ FLA
Sbjct: 924 QPLLVGFLQIFSFLFANLP-QGSCHYKSSFRVDITIDEVKDTAEKLISRVPVSSHSVFLA 982
Query: 81 GYLYHDLCERLFSSGHLIEALSFGRES 1
GYLY+DLCERL S+G LIEALSF +++
Sbjct: 983 GYLYYDLCERLTSNGRLIEALSFAKQA 1009
>ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|AAW32909.1| separase
[Arabidopsis thaliana] gi|332659286|gb|AEE84686.1|
separase [Arabidopsis thaliana]
Length = 2180
Score = 180 bits (457), Expect(2) = 4e-57
Identities = 94/214 (43%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Frame = -3
Query: 871 QVKIVEILLRNIYATDDL--EKARTLIKKGRLVMTHGIKGLSKCIKCLSEAISILEQ--- 707
++KI +ILL+++Y T+D+ E+AR LI K R+ T G + +++CI LSEAISIL +
Sbjct: 735 RIKIADILLKDVYVTEDMHIERARILIWKARMTRTSGTEHITECICFLSEAISILGELHH 794
Query: 706 -PTKQSSSKSHQLAMAYCLRALCNQEVQPDSKVIMEDIGYALKLWSSINWSVDAHSELET 530
P ++ S SH L +AYCLRA C QE P+SK + +DI +L LW I D+ L T
Sbjct: 795 GPNEEGSPSSHMLPIAYCLRAFCTQEADPNSKKVFQDISTSLNLWLRILSLDDSGDSLPT 854
Query: 529 GNAIQLLYCTADLLSMKGWFHFQYDLYKLIIIFLKRKGVPFEKCLAMLWANRRLTHALCT 350
N I LLY DL+S+KG + +Y+LI K K V E CLAMLW RRL+HALC
Sbjct: 855 ENIIPLLYNMIDLMSVKGCTELHHHIYQLIFRLFKWKNVKLEVCLAMLWECRRLSHALCP 914
Query: 349 TPIHEDVVSSFAQHFDDRSNTVGFWISCIKDSVA 248
+PI + + + +++ D+S + FW+ C+KDS A
Sbjct: 915 SPISDAFIQTLSENCADKSTCIDFWMDCLKDSKA 948
Score = 68.2 bits (165), Expect(2) = 4e-57
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = -1
Query: 243 VGFRQKFSLFDSILPPDGHSNPGSPLGSNVTVDEVKEAALALISGNKT--NSNFLAGYLY 70
+GF+Q F D H+ P S++T+D++K+AA LIS NS+F A YLY
Sbjct: 951 IGFQQNFH--------DLHNKDEGPFQSDITIDDIKDAASELISSASLSGNSSFAAAYLY 1002
Query: 69 HDLCERLFSSGHLIEALSFGRES 1
+DLCERL S G L EALS+ +E+
Sbjct: 1003 YDLCERLISFGKLSEALSYAKEA 1025
>ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287|gb|AEE84687.1| separase
[Arabidopsis thaliana]
Length = 2177
Score = 180 bits (457), Expect(2) = 4e-57
Identities = 94/214 (43%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Frame = -3
Query: 871 QVKIVEILLRNIYATDDL--EKARTLIKKGRLVMTHGIKGLSKCIKCLSEAISILEQ--- 707
++KI +ILL+++Y T+D+ E+AR LI K R+ T G + +++CI LSEAISIL +
Sbjct: 735 RIKIADILLKDVYVTEDMHIERARILIWKARMTRTSGTEHITECICFLSEAISILGELHH 794
Query: 706 -PTKQSSSKSHQLAMAYCLRALCNQEVQPDSKVIMEDIGYALKLWSSINWSVDAHSELET 530
P ++ S SH L +AYCLRA C QE P+SK + +DI +L LW I D+ L T
Sbjct: 795 GPNEEGSPSSHMLPIAYCLRAFCTQEADPNSKKVFQDISTSLNLWLRILSLDDSGDSLPT 854
Query: 529 GNAIQLLYCTADLLSMKGWFHFQYDLYKLIIIFLKRKGVPFEKCLAMLWANRRLTHALCT 350
N I LLY DL+S+KG + +Y+LI K K V E CLAMLW RRL+HALC
Sbjct: 855 ENIIPLLYNMIDLMSVKGCTELHHHIYQLIFRLFKWKNVKLEVCLAMLWECRRLSHALCP 914
Query: 349 TPIHEDVVSSFAQHFDDRSNTVGFWISCIKDSVA 248
+PI + + + +++ D+S + FW+ C+KDS A
Sbjct: 915 SPISDAFIQTLSENCADKSTCIDFWMDCLKDSKA 948
Score = 68.2 bits (165), Expect(2) = 4e-57
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = -1
Query: 243 VGFRQKFSLFDSILPPDGHSNPGSPLGSNVTVDEVKEAALALISGNKT--NSNFLAGYLY 70
+GF+Q F D H+ P S++T+D++K+AA LIS NS+F A YLY
Sbjct: 951 IGFQQNFH--------DLHNKDEGPFQSDITIDDIKDAASELISSASLSGNSSFAAAYLY 1002
Query: 69 HDLCERLFSSGHLIEALSFGRES 1
+DLCERL S G L EALS+ +E+
Sbjct: 1003 YDLCERLISFGKLSEALSYAKEA 1025
>ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp.
lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein
ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata]
Length = 2186
Score = 176 bits (447), Expect(2) = 6e-55
Identities = 93/214 (43%), Positives = 133/214 (62%), Gaps = 6/214 (2%)
Frame = -3
Query: 871 QVKIVEILLRNIYATDDL--EKARTLIKKGRLVMTHGIKGLSKCIKCLSEAISIL----E 710
++KI +ILL+++Y T+D+ E+AR LI K ++ T G + +++CI LSEAISIL
Sbjct: 737 RIKITDILLKDVYVTEDMHIERARILIWKAQMTRTSGTEHITECICFLSEAISILGVLHH 796
Query: 709 QPTKQSSSKSHQLAMAYCLRALCNQEVQPDSKVIMEDIGYALKLWSSINWSVDAHSELET 530
P K+ S S L +AYCLRA C QE +P+SK + +DI +L LW I D+ L T
Sbjct: 797 GPNKEGSPSSPMLPIAYCLRAFCTQEAEPNSKKVFQDISTSLNLWLKILSLDDSGDSLPT 856
Query: 529 GNAIQLLYCTADLLSMKGWFHFQYDLYKLIIIFLKRKGVPFEKCLAMLWANRRLTHALCT 350
N I LLY DL+S+KG + +Y+LI K K V E CLAMLW RRL+HALC
Sbjct: 857 ENIIPLLYNMIDLMSVKGCTELHHHIYQLIFRLFKWKKVKLEVCLAMLWECRRLSHALCP 916
Query: 349 TPIHEDVVSSFAQHFDDRSNTVGFWISCIKDSVA 248
+PI + + + +++ D+S + FW+ C+KDS A
Sbjct: 917 SPISDAFIQTLSENCGDKSTCIDFWMDCLKDSKA 950
Score = 64.7 bits (156), Expect(2) = 6e-55
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = -1
Query: 243 VGFRQKFSLFDSILPPDGHSNPGSPLGSNVTVDEVKEAALALISGNKT--NSNFLAGYLY 70
+GF+Q F D H+ P S+ T+ ++K+AA LIS NS+F+A YLY
Sbjct: 953 IGFQQNFH--------DLHNKDEGPFQSDFTIGDIKDAASELISSASLSGNSSFVAAYLY 1004
Query: 69 HDLCERLFSSGHLIEALSFGRES 1
+DLCERL S G L EALS+ +E+
Sbjct: 1005 YDLCERLISFGKLSEALSYAKEA 1027