BLASTX nr result

ID: Coptis25_contig00033557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033557
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138139.1| PREDICTED: germin-like protein subfamily T m...   129   3e-28
ref|XP_002511486.1| Rhicadhesin receptor precursor, putative [Ri...   128   6e-28
ref|XP_002267507.1| PREDICTED: germin-like protein subfamily T m...   127   9e-28
emb|CAN75382.1| hypothetical protein VITISV_027597 [Vitis vinifera]   122   4e-26
ref|XP_004138293.1| PREDICTED: germin-like protein subfamily T m...   121   5e-26

>ref|XP_004138139.1| PREDICTED: germin-like protein subfamily T member 2-like [Cucumis
           sativus] gi|449477347|ref|XP_004154997.1| PREDICTED:
           germin-like protein subfamily T member 2-like [Cucumis
           sativus]
          Length = 221

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/104 (64%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = +2

Query: 71  RPSKINMTHSTSCFQFLILMTALLHPCFS-DPDPLQDFCVADLKETITLNGFACKPVSQV 247
           R S +NM     CF  L+L+    +P  S DPDPLQDFCVADL  T++LNGF CKP S+V
Sbjct: 5   RSSLLNML---VCFIILLLLP---YPSLSADPDPLQDFCVADLNATVSLNGFPCKPASEV 58

Query: 248 TSTDFFFDGLTKEGNTTNVFGSMVTPGNVLSFPGLNTLGISMNR 379
           T+ DFFFDGL+KEGNT N FG  VT GNVL+FPGLNTLG+SMNR
Sbjct: 59  TADDFFFDGLSKEGNTDNPFGFGVTQGNVLTFPGLNTLGLSMNR 102


>ref|XP_002511486.1| Rhicadhesin receptor precursor, putative [Ricinus communis]
           gi|223550601|gb|EEF52088.1| Rhicadhesin receptor
           precursor, putative [Ricinus communis]
          Length = 220

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/100 (63%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
 Frame = +2

Query: 89  MTHSTSCFQFLILMTALLHPCF---SDPDPLQDFCVADLKETITLNGFACKPVSQVTSTD 259
           M HS+        +  LL P +   +DPDPLQDFCVADLK +I++NGF CKP +++TS D
Sbjct: 1   MAHSSLFHLLCSSIVLLLLPMYINSADPDPLQDFCVADLKGSISVNGFPCKPAAEITSDD 60

Query: 260 FFFDGLTKEGNTTNVFGSMVTPGNVLSFPGLNTLGISMNR 379
           FFFDGL+KEGNTTN+FG   T  NVLSFPGLNTLGISMNR
Sbjct: 61  FFFDGLSKEGNTTNMFGWSATTANVLSFPGLNTLGISMNR 100


>ref|XP_002267507.1| PREDICTED: germin-like protein subfamily T member 2-like [Vitis
           vinifera]
          Length = 225

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/101 (63%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
 Frame = +2

Query: 89  MTHSTS----CFQFLILMTALLHPCFSDPDPLQDFCVADLKETITLNGFACKPVSQVTST 256
           MT STS     F  L+ +   L    +D DPLQDFC+ADL  T+ +NGF CKP S VTS 
Sbjct: 5   MTSSTSPLSLIFSLLVYVVLPLVSRSADSDPLQDFCIADLNATVIVNGFPCKPASAVTSD 64

Query: 257 DFFFDGLTKEGNTTNVFGSMVTPGNVLSFPGLNTLGISMNR 379
           DFFFDGL+KEG+T N+FGS VT GNVLSFPG+NTLGISMNR
Sbjct: 65  DFFFDGLSKEGSTANIFGSSVTRGNVLSFPGVNTLGISMNR 105


>emb|CAN75382.1| hypothetical protein VITISV_027597 [Vitis vinifera]
          Length = 522

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/75 (74%), Positives = 63/75 (84%)
 Frame = +2

Query: 155 SDPDPLQDFCVADLKETITLNGFACKPVSQVTSTDFFFDGLTKEGNTTNVFGSMVTPGNV 334
           +D DPLQDFC ADL  T+ +NGF CKP S VTS DFFFDGL+KEG+T N+FGS VT GNV
Sbjct: 328 ADSDPLQDFCXADLNATVIVNGFPCKPASAVTSDDFFFDGLSKEGSTANIFGSSVTRGNV 387

Query: 335 LSFPGLNTLGISMNR 379
           LSFPG+NTLGISMNR
Sbjct: 388 LSFPGVNTLGISMNR 402


>ref|XP_004138293.1| PREDICTED: germin-like protein subfamily T member 1-like [Cucumis
           sativus] gi|449477612|ref|XP_004155071.1| PREDICTED:
           germin-like protein subfamily T member 1-like [Cucumis
           sativus]
          Length = 213

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
 Frame = +2

Query: 110 FQFLILMTALLHPCFS-DPDPLQDFCVADLKETITLNGFACKPVSQVTSTDFFFDGLTKE 286
           F FLIL+    HP  S DPDPLQDFCVADL  T+++ GF CKP+S+VT  DFF+DGL+KE
Sbjct: 6   FIFLILLP---HPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGLSKE 62

Query: 287 GNTTNVFGSMVTPGNVLSFPGLNTLGISMNR 379
           GNT N FG  +TPGNV + PGLNTLG+SMNR
Sbjct: 63  GNTKNPFGFGLTPGNVHALPGLNTLGLSMNR 93


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