BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033544
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20118.3| unnamed protein product [Vitis vinifera]              197   2e-48
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]      163   3e-38
emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]   155   4e-36
emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]   152   3e-35
emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]   152   6e-35

>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  197 bits (500), Expect = 2e-48
 Identities = 93/179 (51%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
 Frame = +3

Query: 81   QRKDERMT-SAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSNTWWFDSG 257
            Q  D + T S     K GH +KDCIKRKAWFEK+G   +FVC+ESNL EVPSNTWW DSG
Sbjct: 609  QNHDGKFTVSCYFCGKKGHVKKDCIKRKAWFEKRGINLSFVCYESNLAEVPSNTWWIDSG 668

Query: 258  SNVHISNTMQGFLSTRTTSPNEAYLFMGNKVKAPIEAFETFRLVLDFGYHLDLEQTLYVP 437
            +  H++N MQGFL+TR    +E +L+MGN++K  + A  T+RL+L+ G+ +DL  T YVP
Sbjct: 669  ATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVEVVAVGTYRLLLETGHRMDLLNTFYVP 728

Query: 438  SVSQNLISLSKLDSDGFSLQVGSGCFNLIKNAKFIGLGFLVNGLYQRNLEHSFSESLLT 614
            S+S+NL+SLSKLD+ G+S+   SG  +L+ N+  IG G L +GLY+ +L H F+++L+T
Sbjct: 729  SISRNLVSLSKLDATGYSVLFSSGQLSLMLNSVTIGSGILCDGLYKISLNHEFAQALIT 787


>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/131 (56%), Positives = 97/131 (74%)
 Frame = +3

Query: 81  QRKDERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSNTWWFDSGS 260
           +R+ ++       KK+GHF+KDC+KRKAWFEKKGK ++FVC E NLIEVP+NTWW DSG+
Sbjct: 89  ERQIKKEIKCFFCKKTGHFKKDCLKRKAWFEKKGKHYSFVCSELNLIEVPNNTWWLDSGA 148

Query: 261 NVHISNTMQGFLSTRTTSPNEAYLFMGNKVKAPIEAFETFRLVLDFGYHLDLEQTLYVPS 440
             H+SN  QGF S +     E YLFMGN++KA IE   T+RL+LD G H+DLE  LYVP 
Sbjct: 149 TTHVSNIKQGFSSIQPIRGAEQYLFMGNRMKALIEGIGTYRLILDTGCHVDLESCLYVPE 208

Query: 441 VSQNLISLSKL 473
            ++NL+S+S+L
Sbjct: 209 CARNLVSISRL 219


>emb|CAN83369.1| hypothetical protein VITISV_011463 [Vitis vinifera]
          Length = 1156

 Score =  155 bits (393), Expect = 4e-36
 Identities = 78/169 (46%), Positives = 107/169 (63%)
 Frame = +3

Query: 81  QRKDERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSNTWWFDSGS 260
           Q+K ++  +    KK+GH +K C K  AW EKKG    FVC E NL  VP+NTWW D+G+
Sbjct: 207 QKKQDKEITCFFCKKTGHMKKTCTKYTAWREKKGTLLNFVCSEINLAVVPTNTWWIDTGT 266

Query: 261 NVHISNTMQGFLSTRTTSPNEAYLFMGNKVKAPIEAFETFRLVLDFGYHLDLEQTLYVPS 440
             HIS TMQG L +R ++ +E Y+++GN  K  ++A   FRL LD G  LDLE+T  VPS
Sbjct: 267 TTHISVTMQGCLRSRMSTDDERYIYVGNGNKVAVKAIGLFRLQLDSGCTLDLEETFVVPS 326

Query: 441 VSQNLISLSKLDSDGFSLQVGSGCFNLIKNAKFIGLGFLVNGLYQRNLE 587
             +NLIS+S LD  G+    G+G  +L  N+K IG G L + LY+ N++
Sbjct: 327 FRRNLISISCLDKFGYCCSFGNGMVSLYPNSKVIGTGSLTDKLYKLNIK 375


>emb|CAN79309.1| hypothetical protein VITISV_020559 [Vitis vinifera]
          Length = 1851

 Score =  152 bits (385), Expect = 3e-35
 Identities = 71/173 (41%), Positives = 110/173 (63%)
 Frame = +3

Query: 93  ERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSNTWWFDSGSNVHI 272
           +++      KK GH +K C K + W EKKGKP +F C+ESN+++V  NTWW  SGS +H+
Sbjct: 232 KKVNKCFFYKKKGHMKKGCTKFQKWLEKKGKPISFFCYESNMVDVIYNTWWIYSGSTIHV 291

Query: 273 SNTMQGFLSTRTTSPNEAYLFMGNKVKAPIEAFETFRLVLDFGYHLDLEQTLYVPSVSQN 452
           SNT+QG  + R   P+E  ++ GNK+++ +EA  T  LVL  G+ L+LE+T YVPS S+N
Sbjct: 292 SNTLQGMQNLRKPMPSEQCIYSGNKMRSHVEAVGTCNLVLSSGFILNLEKTFYVPSFSRN 351

Query: 453 LISLSKLDSDGFSLQVGSGCFNLIKNAKFIGLGFLVNGLYQRNLEHSFSESLL 611
           LIS+S++   G+S       F+L   +  +G G L NGL+  +L++  + + +
Sbjct: 352 LISVSRIVPLGYSFSFYETSFSLFYKSNLVGNGTLSNGLFSIDLQNDTTNNTM 404


>emb|CAN81793.1| hypothetical protein VITISV_020571 [Vitis vinifera]
          Length = 1193

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/169 (45%), Positives = 105/169 (62%)
 Frame = +3

Query: 81  QRKDERMTSAISVKKSGHFQKDCIKRKAWFEKKGKPWAFVCFESNLIEVPSNTWWFDSGS 260
           Q+K ++  +    KK+GH +K C K  AW EKKG    FVC E NL  VP++TWW D+G+
Sbjct: 105 QKKQDKEITCFFYKKAGHMKKTCTKYAAWREKKGTLLNFVCSEINLAVVPTDTWWIDTGA 164

Query: 261 NVHISNTMQGFLSTRTTSPNEAYLFMGNKVKAPIEAFETFRLVLDFGYHLDLEQTLYVPS 440
             HIS TMQG L +R     E Y+++GN  KA ++A   FRL LD G  LDLE+T  VPS
Sbjct: 165 TTHISVTMQGCLRSRMPIDGERYIYVGNGNKAAVKAIGLFRLQLDSGCTLDLEETFVVPS 224

Query: 441 VSQNLISLSKLDSDGFSLQVGSGCFNLIKNAKFIGLGFLVNGLYQRNLE 587
             +NLIS+S LD  G+    G+G  +L  N+  IG+G L + LY+ N++
Sbjct: 225 FRRNLISVSCLDKFGYCCSFGNGMVSLYLNSNIIGIGSLTDKLYKLNIK 273