BLASTX nr result

ID: Coptis25_contig00033523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033523
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279142.1| PREDICTED: uncharacterized protein LOC100267...   112   6e-23
ref|XP_003622974.1| hypothetical protein MTR_7g058970 [Medicago ...   111   1e-22
gb|AFK42804.1| unknown [Lotus japonicus]                              110   1e-22
ref|XP_002302844.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003543292.1| PREDICTED: uncharacterized protein LOC100803...   108   8e-22

>ref|XP_002279142.1| PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera]
          Length = 107

 Score =  112 bits (279), Expect = 6e-23
 Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 9/107 (8%)
 Frame = -2

Query: 418 MWPLLAAVKRKFGNIRKSSRVADENMFGEGND------GAELHHE---WNFLSVLETVVQ 266
           MW +LAA++R F NIRKS RVADENMFG GN       G ++      W+  S + ++V+
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGGNQAELPIFGRDMERRARGWDGFSAVYSIVR 60

Query: 265 GPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 125
            PL L SC + P V GADG+WV G++   SE+NHLMV+D MRYAILM
Sbjct: 61  VPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107


>ref|XP_003622974.1| hypothetical protein MTR_7g058970 [Medicago truncatula]
           gi|355497989|gb|AES79192.1| hypothetical protein
           MTR_7g058970 [Medicago truncatula]
          Length = 125

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 13/111 (11%)
 Frame = -2

Query: 418 MWPLLAAVKR-KFGNIRKSSRVADENMFGEGNDGAELH------------HEWNFLSVLE 278
           MW L+AAV+R     ++KSS+VADENMF EGN G E+             H W+  SV+ 
Sbjct: 15  MWHLVAAVRRINIYKMKKSSKVADENMFEEGNRGVEVAMFGGERGRRQHGHGWSGFSVIY 74

Query: 277 TVVQGPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 125
            ++Q P+ + SC++ P+V G+DG+W  GE+G+ SEINH+MVND MRYAILM
Sbjct: 75  AILQAPISILSCLSNPRVNGSDGVWSTGEFGQISEINHIMVNDSMRYAILM 125


>gb|AFK42804.1| unknown [Lotus japonicus]
          Length = 100

 Score =  110 bits (276), Expect = 1e-22
 Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = -2

Query: 418 MWPLLAAVKRKFGNIRKSSRVADENMFGEGNDGA--ELHHEWNFLSVLETVVQGPLLLFS 245
           MW L+AAV R   N +KSSRVADE+MF  G+D       H+W+  S++  ++  P+ + S
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFEAGHDRGIRRSQHDWSGFSLIYAILHAPISILS 60

Query: 244 CVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 125
           CV+ PQ  G DG WV GE+ + SE+NH+MVND MRYAILM
Sbjct: 61  CVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMRYAILM 100


>ref|XP_002302844.1| predicted protein [Populus trichocarpa] gi|222844570|gb|EEE82117.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score =  109 bits (273), Expect = 3e-22
 Identities = 58/107 (54%), Positives = 69/107 (64%), Gaps = 9/107 (8%)
 Frame = -2

Query: 418 MWPLLAAVKRKFGNIRKSSRVADENMFGEGNDGAELH---------HEWNFLSVLETVVQ 266
           MW  LA ++R   NIRKS RVADE+MFG G +GAE             WN LS L  +V 
Sbjct: 1   MWHKLARLRRNVQNIRKSPRVADESMFG-GMNGAEFPILVRDMNRAQRWNSLSALFRIVL 59

Query: 265 GPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 125
            P  + SC +QP V GADG+WV GE+ + SE+NHLMVND MRYAILM
Sbjct: 60  APFSILSCSSQPHVNGADGLWVTGEFAQLSEMNHLMVNDSMRYAILM 106


>ref|XP_003543292.1| PREDICTED: uncharacterized protein LOC100803680 [Glycine max]
          Length = 107

 Score =  108 bits (269), Expect = 8e-22
 Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 10/108 (9%)
 Frame = -2

Query: 418 MWPLLAAVKRKFGNIRKSSRVADENMFGEGNDGAEL----------HHEWNFLSVLETVV 269
           MW L+AA+ RK  N +K SRVADENMF E  +G EL           H W+ +S++  ++
Sbjct: 1   MWRLVAALTRKLQNTKKGSRVADENMF-EAANGVELAMFRHDRGRRDHGWSGISLIYGIL 59

Query: 268 QGPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 125
             P+ + SCV+ PQ  G+DG+WV GE+ + SE+NHLMVND MRYAILM
Sbjct: 60  HAPISILSCVSHPQANGSDGVWVSGEFVQISEMNHLMVNDSMRYAILM 107


Top