BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033501
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...    79   5e-13
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...    77   2e-12
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...    70   2e-10
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...    70   2e-10
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...    69   3e-10

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
           vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
           product [Vitis vinifera]
          Length = 335

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -3

Query: 411 SLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 283
           SLQHICT+ EIEEAL NVG+P TSRPEELTLDDFVRLHNLIVK
Sbjct: 292 SLQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
           gi|223548969|gb|EEF50458.1| dimethyladenosine
           transferase, putative [Ricinus communis]
          Length = 338

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = -3

Query: 411 SLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 283
           SLQHICT+PEIE+AL NVG+P TSRPEELTLDDFV+LHNLI +
Sbjct: 295 SLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLIAR 337


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = -3

Query: 411 SLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 283
           SLQHICT+ EIEEAL ++G+  TSRPEELTLDDFV+LHNLI K
Sbjct: 298 SLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
           [Glycine max]
          Length = 341

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 38/43 (88%)
 Frame = -3

Query: 411 SLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLIVK 283
           SLQHICT+ EIEEAL ++G+  TSRPEELTLDDFV+LHNLI K
Sbjct: 298 SLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLIAK 340


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
           lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
           ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 411 SLQHICTAPEIEEALGNVGVPVTSRPEELTLDDFVRLHNLI 289
           SLQHI ++PEIE+ALG  G+PVTSRPEELTLDDFV+LHN+I
Sbjct: 299 SLQHISSSPEIEKALGVAGLPVTSRPEELTLDDFVKLHNVI 339