BLASTX nr result

ID: Coptis25_contig00033497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033497
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245...   132   7e-29
emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]   125   5e-27
ref|XP_002534353.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_003606621.1| Auxin-regulated protein [Medicago truncatula...   105   5e-21
ref|XP_003539698.1| PREDICTED: uncharacterized protein LOC100779...   104   1e-20

>ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245073 [Vitis vinifera]
           gi|297746132|emb|CBI16188.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  132 bits (331), Expect = 7e-29
 Identities = 77/116 (66%), Positives = 90/116 (77%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   SIKDYGSVSGKDHQGLSLVSQYKSRLPRGAPNHQVSVLENVNSFGGNGIGVVLEDKEYFS 182
           S KD G    KD QGL+L+SQYK+RLPRGA N + S +EN   +GG    V LEDKEYFS
Sbjct: 298 SFKDCGPTIVKD-QGLALISQYKARLPRGAANQETS-MENPR-YGG----VSLEDKEYFS 350

Query: 183 GSLIETKKNDFSALKRSSSYNADRSSKLDLKEKEIDGVRAKCIPRRPK-ISMKKES 347
           GSLIETKK+ F ALKRSSSYNAD SS+L++ +KE+DGVRAKCIPRR K +S KKES
Sbjct: 351 GSLIETKKDQFPALKRSSSYNADGSSQLEMGDKEVDGVRAKCIPRRSKTLSAKKES 406


>emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]
          Length = 942

 Score =  125 bits (315), Expect = 5e-27
 Identities = 71/106 (66%), Positives = 83/106 (78%)
 Frame = +3

Query: 3   SIKDYGSVSGKDHQGLSLVSQYKSRLPRGAPNHQVSVLENVNSFGGNGIGVVLEDKEYFS 182
           S KD G    KD QGL+L+SQYK+RLPRGA N + S +EN   +GG    V LEDKEYFS
Sbjct: 298 SFKDCGPTIVKD-QGLALISQYKARLPRGAANQETS-MENPR-YGG----VSLEDKEYFS 350

Query: 183 GSLIETKKNDFSALKRSSSYNADRSSKLDLKEKEIDGVRAKCIPRR 320
           GSLIETKK+ F ALKRSSSYNAD SS+L++ +KE+DGVRAKCIPRR
Sbjct: 351 GSLIETKKDQFPALKRSSSYNADGSSQLEMGDKEVDGVRAKCIPRR 396


>ref|XP_002534353.1| conserved hypothetical protein [Ricinus communis]
           gi|223525445|gb|EEF28033.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  119 bits (299), Expect = 3e-25
 Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   SIKDYGSVSGKDHQGLSLVSQYKSRLPRGAPNHQVSVLENVNSFGGNGIGVVLEDKEYFS 182
           S +D G+ + K+ QGLSL+  YK RLPRG  +   +  E +N FGG    V LEDKEYFS
Sbjct: 306 SFRDCGATAVKE-QGLSLIGHYKGRLPRGGGSRVGTSKEFLN-FGG----VRLEDKEYFS 359

Query: 183 GSLIETKKNDFSALKRSSSYNADRSSKLDLKEKEIDGVRAKCIPRRPK-ISMKKES 347
           GSLIETKK +  ALKRSSSYNADRSS L L EKE++G R KCIPR+PK I  KKE+
Sbjct: 360 GSLIETKKEEVPALKRSSSYNADRSSHLHLAEKEVEGARTKCIPRKPKAIPTKKET 415


>ref|XP_003606621.1| Auxin-regulated protein [Medicago truncatula]
           gi|355507676|gb|AES88818.1| Auxin-regulated protein
           [Medicago truncatula]
          Length = 422

 Score =  105 bits (263), Expect = 5e-21
 Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
 Frame = +3

Query: 18  GSVSGKDHQGLSLVSQYKSRLPRGAPNH---QVSVLENVNSFGGNGIGVVLEDKEYFSGS 188
           G+ SGKD Q  SLV  YKSRLPRG  NH   +V  L  +         V LEDKEYFSGS
Sbjct: 291 GASSGKD-QRFSLVGHYKSRLPRGGGNHVGKEVGTLVEIPDLNR----VRLEDKEYFSGS 345

Query: 189 LIETKKNDFSALKRSSSYNADRSSKLDLKEKEIDGVRAKCIPRRPKISMKKE 344
           LIETKK +  A KRSSSYNAD SS+L + E E D VRAKCIPR+ K  + K+
Sbjct: 346 LIETKKVEAPAFKRSSSYNADSSSRLQIMEHEGDMVRAKCIPRKSKTLLTKK 397


>ref|XP_003539698.1| PREDICTED: uncharacterized protein LOC100779732 [Glycine max]
          Length = 448

 Score =  104 bits (260), Expect = 1e-20
 Identities = 66/116 (56%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
 Frame = +3

Query: 3   SIKDYGSVSGKDHQGLSLVSQYKSRLPRGAPNHQVSVLENVNSFGGNGIGVV-LEDKEYF 179
           S K+ G+ + KD QG SLV  YKSR+PRGA NH  +  E   S     +  V LEDKEYF
Sbjct: 314 SFKECGANAVKD-QGFSLVGHYKSRMPRGAGNHSGN--ETGTSMEIPDLSRVRLEDKEYF 370

Query: 180 SGSLIETKKNDFSALKRSSSYNADRSSKLDLKEKEIDGVRAKCIPRRPK-ISMKKE 344
           SGSLIETKK +  ALKRSSSYNAD  S+L + E E + VRAKCIPR+ K +  KKE
Sbjct: 371 SGSLIETKKVETPALKRSSSYNADSGSRLQIVEHEGEAVRAKCIPRKSKTLPTKKE 426


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