BLASTX nr result

ID: Coptis25_contig00033496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033496
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68396.1| hypothetical protein VITISV_021096 [Vitis vinifera]   105   4e-21
ref|XP_003634722.1| PREDICTED: uncharacterized protein LOC100852...   101   6e-20
ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|NP_175494.1| Plant mobile domain protein family [Arabidopsis...   100   9e-20
ref|XP_002319295.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>emb|CAN68396.1| hypothetical protein VITISV_021096 [Vitis vinifera]
          Length = 1195

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -3

Query: 315 ELVVGLAESWCPDANTFVFSWGEATMTLEDVSIIGGFPILGEPLTKPLTGXXXXXXXXXX 136
           +LV G+   WCP+ NTFVF WGEAT+TLEDV I+GGFP+LGE ++ PL            
Sbjct: 111 DLVYGVTAKWCPETNTFVFPWGEATVTLEDVMILGGFPVLGESVSAPLEDKEMLETEEKL 170

Query: 135 KGYQ-DLARSKAHKVSYSPWTKLFMGKNGDLEHAAFLALWLSRFVV 1
              +  + R+KA K   S W   +MG    +EH AFL++W+SRFV+
Sbjct: 171 IAERLQVTRTKAQKACQSGWMNRWMGTGNQIEHEAFLSMWVSRFVL 216



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -3

Query: 255 WGEATMTLEDVSIIGGFPILGEPLTKPLTG-XXXXXXXXXXKGYQDLARSKAHKVSYSPW 79
           WGEAT+TLE V I+GGF +LGE ++ PL             +  + ++R  A K   S W
Sbjct: 745 WGEATITLEAVMILGGFTVLGESVSAPLEEMELMEIEEKLIEERRQVSRGSAQKACQSVW 804

Query: 78  TKLFMGKNGDLEHAAFLALWLSR 10
              FMG    LEH AFL+LWLSR
Sbjct: 805 LARFMGTGSQLEHEAFLSLWLSR 827


>ref|XP_003634722.1| PREDICTED: uncharacterized protein LOC100852441 [Vitis vinifera]
           gi|297737405|emb|CBI26606.3| unnamed protein product
           [Vitis vinifera]
          Length = 630

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/104 (46%), Positives = 63/104 (60%)
 Frame = -3

Query: 315 ELVVGLAESWCPDANTFVFSWGEATMTLEDVSIIGGFPILGEPLTKPLTGXXXXXXXXXX 136
           +L  GLAE WCP  N+F+F WGE T+TLED+ ++GGF ++GEP++KPL            
Sbjct: 116 DLFWGLAERWCPSTNSFIFPWGETTITLEDIIVLGGFSVIGEPVSKPLETTELMKLEENL 175

Query: 135 KGYQDLARSKAHKVSYSPWTKLFMGKNGDLEHAAFLALWLSRFV 4
                  + K  K  +  W K FMGK  +LEH AFL LWLSR+V
Sbjct: 176 LKLLTQLK-KTLKSCHQEWMKRFMGKGSELEHIAFLFLWLSRYV 218


>ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|222858206|gb|EEE95753.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
 Frame = -3

Query: 321 DKELVVGLAESWCPDANTFVFSWGEATMTLEDVSIIGGFPILGEPLTKPL-TGXXXXXXX 145
           D + ++GLAE WC + NTF+F WGEAT+TLED+ ++ G+ +LG P+  PL T        
Sbjct: 115 DDDFLIGLAEKWCFETNTFIFPWGEATITLEDI-LVAGYSVLGSPVFTPLETEELKEAEQ 173

Query: 144 XXXKGYQDLARSKAHKVSYSPWTKLFMGKNGDLEHAAFLALWLSRFV 4
              +  + L RSK+ KV +S W K  M  N ++EH AFL+LWLSRFV
Sbjct: 174 KLMEIGELLRRSKSKKVDHSSWIKYLMENNSEVEHEAFLSLWLSRFV 220


>ref|NP_175494.1| Plant mobile domain protein family [Arabidopsis thaliana]
           gi|12321786|gb|AAG50928.1|AC079284_3 hypothetical
           protein [Arabidopsis thaliana]
           gi|91805349|gb|ABE65404.1| hypothetical protein
           At1g50790 [Arabidopsis thaliana]
           gi|332194470|gb|AEE32591.1| Plant mobile domain protein
           family [Arabidopsis thaliana]
          Length = 812

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/104 (47%), Positives = 63/104 (60%)
 Frame = -3

Query: 315 ELVVGLAESWCPDANTFVFSWGEATMTLEDVSIIGGFPILGEPLTKPLTGXXXXXXXXXX 136
           +LV+G+AE WCPD NTFVFSWGEAT+TLEDV ++ GF +LG P+   L            
Sbjct: 100 DLVMGIAEKWCPDTNTFVFSWGEATITLEDVMVLLGFSVLGSPVFATLDSSGKEIMAKLG 159

Query: 135 KGYQDLARSKAHKVSYSPWTKLFMGKNGDLEHAAFLALWLSRFV 4
           K +  + + K   V+   W + FM    +LEH AFL LWLS FV
Sbjct: 160 KEWLKIKKDKGTFVTQIAWIERFMDSGDELEHLAFLVLWLSYFV 203


>ref|XP_002319295.1| predicted protein [Populus trichocarpa] gi|222857671|gb|EEE95218.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
 Frame = -3

Query: 315 ELVVGLAESWCPDANTFVFSWGEATMTLEDVSIIGGFPILGEPLTKPLTG-XXXXXXXXX 139
           EL++GL+E WC D NTF F WGEAT+TLEDV ++GG+ +LG P++  +            
Sbjct: 117 ELIIGLSEKWCTDTNTFFFPWGEATITLEDVIVLGGYSVLGSPVSCSVENREWKVIEEKL 176

Query: 138 XKGYQDLARSKAHKVSYSPWTKLFMGKNGDLEHAAFLALWLSRFV 4
               +++ RS+A K     W K+F     ++EH AFLALWLSR V
Sbjct: 177 MDARKEVVRSRARKACQLSWMKMFNNGGSEIEHEAFLALWLSRLV 221


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