BLASTX nr result

ID: Coptis25_contig00033495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033495
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1...   147   1e-33
ref|XP_003554389.1| PREDICTED: ABC transporter B family member 1...   146   2e-33
emb|CBI30138.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1...   145   3e-33
ref|XP_004173903.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   145   4e-33

>ref|XP_003520656.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1342

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/108 (67%), Positives = 81/108 (75%)
 Frame = +1

Query: 1   AKGDSSVYAKLIRMQEMAHENAIXXXXXXXXXXXXXXXXXXXPIIARNSSYGRSPYSRRL 180
           +KG++ VYAKLI+MQEMAHE A+                   PIIARNSSYGRSPYSRRL
Sbjct: 646 SKGENGVYAKLIKMQEMAHETAVNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRL 705

Query: 181 SDFSNSEFSLSIDGGHSSYRLEKLAFKKQASSFWRLVKMNSPEWKYAL 324
           SDFS S+FSLS+D  H SYRLEKLAFK+QASSFWRL KMNSPEW YAL
Sbjct: 706 SDFSTSDFSLSLDASHPSYRLEKLAFKEQASSFWRLAKMNSPEWLYAL 753


>ref|XP_003554389.1| PREDICTED: ABC transporter B family member 1-like isoform 1
           [Glycine max]
          Length = 1339

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/108 (67%), Positives = 81/108 (75%)
 Frame = +1

Query: 1   AKGDSSVYAKLIRMQEMAHENAIXXXXXXXXXXXXXXXXXXXPIIARNSSYGRSPYSRRL 180
           +KG++ VYAKLI+MQEMAHE A+                   PIIARNSSYGRSPYSRRL
Sbjct: 643 SKGENGVYAKLIKMQEMAHETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRL 702

Query: 181 SDFSNSEFSLSIDGGHSSYRLEKLAFKKQASSFWRLVKMNSPEWKYAL 324
           SDFS S+FSLS+D  H SYRLEKLAFK+QASSFWRL KMNSPEW YAL
Sbjct: 703 SDFSTSDFSLSLDASHPSYRLEKLAFKEQASSFWRLAKMNSPEWLYAL 750


>emb|CBI30138.3| unnamed protein product [Vitis vinifera]
          Length = 999

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/108 (67%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   AKGDSSVYAKLIRMQEMAHENAIXXXXXXXXXXXXXXXXXXXPIIARNSSYGRSPYSRRL 180
           AKG++ VYAKLIRMQE AHE A+                   PIIARNSSYGRSPYSRRL
Sbjct: 582 AKGENGVYAKLIRMQETAHETALSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRL 641

Query: 181 SDFSNSEFSLSIDGGHSSYRLEKLAFKKQASSFWRLVKMNSPEWKYAL 324
           SDFS S+FSLS+D  H +YRLEKLAFK+QASSFWRL KMNSPEW YAL
Sbjct: 642 SDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWVYAL 689


>ref|XP_002266505.1| PREDICTED: ABC transporter B family member 1-like [Vitis vinifera]
          Length = 1354

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/108 (67%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   AKGDSSVYAKLIRMQEMAHENAIXXXXXXXXXXXXXXXXXXXPIIARNSSYGRSPYSRRL 180
           AKG++ VYAKLIRMQE AHE A+                   PIIARNSSYGRSPYSRRL
Sbjct: 657 AKGENGVYAKLIRMQETAHETALSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRL 716

Query: 181 SDFSNSEFSLSIDGGHSSYRLEKLAFKKQASSFWRLVKMNSPEWKYAL 324
           SDFS S+FSLS+D  H +YRLEKLAFK+QASSFWRL KMNSPEW YAL
Sbjct: 717 SDFSTSDFSLSLDASHPNYRLEKLAFKEQASSFWRLAKMNSPEWVYAL 764


>ref|XP_004173903.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           1-like, partial [Cucumis sativus]
          Length = 703

 Score =  145 bits (365), Expect = 4e-33
 Identities = 75/108 (69%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   AKGDSSVYAKLIRMQEMAHENAIXXXXXXXXXXXXXXXXXXXPIIARNSSYGRSPYSRRL 180
           AKG++ VYAKLIRMQEMAHE A+                   PIIARNSSYGRSPYSRRL
Sbjct: 37  AKGENGVYAKLIRMQEMAHETALNNARKSSARPSSARNSVSXPIIARNSSYGRSPYSRRL 96

Query: 181 SDFSNSEFSLSIDGGHSSYRLEKLAFKKQASSFWRLVKMNSPEWKYAL 324
           SDFS S+FSLS+D    +YRLEKLAFK+QASSFWRLVKMNSPEW YAL
Sbjct: 97  SDFSTSDFSLSLDASLPNYRLEKLAFKEQASSFWRLVKMNSPEWLYAL 144


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