BLASTX nr result

ID: Coptis25_contig00033473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033473
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161424.1| PREDICTED: putative SWI/SNF-related matrix-a...    55   6e-06
ref|XP_004139464.1| PREDICTED: putative SWI/SNF-related matrix-a...    55   6e-06

>ref|XP_004161424.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Cucumis sativus]
          Length = 1040

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -3

Query: 108  LKLF*FCL*GTVEERMEAVQARKQRLISGALTDQEV 1
            +K+  F + GTVEERMEAVQARKQRLISGALTDQEV
Sbjct: 992  VKIKRFIVKGTVEERMEAVQARKQRLISGALTDQEV 1027


>ref|XP_004139464.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Cucumis sativus]
          Length = 1040

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -3

Query: 108  LKLF*FCL*GTVEERMEAVQARKQRLISGALTDQEV 1
            +K+  F + GTVEERMEAVQARKQRLISGALTDQEV
Sbjct: 992  VKIKRFIVKGTVEERMEAVQARKQRLISGALTDQEV 1027


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