BLASTX nr result
ID: Coptis25_contig00033463
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033463 (279 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm... 100 9e-20 emb|CBI22967.3| unnamed protein product [Vitis vinifera] 99 3e-19 ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li... 99 3e-19 ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2... 94 1e-17 >ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1| predicted protein [Populus trichocarpa] Length = 645 Score = 103 bits (257), Expect = 1e-20 Identities = 50/85 (58%), Positives = 64/85 (75%) Frame = -1 Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97 +DKLSLE +S N M+F +VV+GQ+KHDVARTFSALLQLVNN VDLER + + + CY+A Sbjct: 517 VDKLSLEVDSKNVMAFTDVVKGQEKHDVARTFSALLQLVNNGEVDLERSQANGESFCYSA 576 Query: 96 VNPFYVRLLSHVNDQKRESLGLGRE 22 VNPF VRLL H DQ+ + ++ Sbjct: 577 VNPFNVRLLGHKKDQEGRQFQMSKK 601 >ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis] gi|223544047|gb|EEF45573.1| conserved hypothetical protein [Ricinus communis] Length = 667 Score = 100 bits (250), Expect = 9e-20 Identities = 51/80 (63%), Positives = 64/80 (80%) Frame = -1 Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97 LDKLSLE N MSFA+VV+GQ+KHDVARTFSALLQLVNN +V+LER VCYTA Sbjct: 514 LDKLSLEANGENVMSFADVVKGQEKHDVARTFSALLQLVNNGDVNLERSGVGGMSVCYTA 573 Query: 96 VNPFYVRLLSHVNDQKRESL 37 +NPF+++LL+H D++R+ L Sbjct: 574 MNPFHIQLLNH--DKRRKDL 591 >emb|CBI22967.3| unnamed protein product [Vitis vinifera] Length = 1281 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/82 (59%), Positives = 65/82 (79%) Frame = -1 Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97 L+KLS + E+GN MSF+ VV GQ+KHDVAR+FSALLQLVNN +V+L+RG D + VCYT Sbjct: 1121 LEKLSHKAENGNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTD 1180 Query: 96 VNPFYVRLLSHVNDQKRESLGL 31 NPFY++LL+ D++RE + L Sbjct: 1181 ANPFYIKLLN--RDKRREEVQL 1200 >ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera] Length = 666 Score = 99.4 bits (246), Expect = 3e-19 Identities = 49/82 (59%), Positives = 65/82 (79%) Frame = -1 Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97 L+KLS + E+GN MSF+ VV GQ+KHDVAR+FSALLQLVNN +V+L+RG D + VCYT Sbjct: 506 LEKLSHKAENGNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTD 565 Query: 96 VNPFYVRLLSHVNDQKRESLGL 31 NPFY++LL+ D++RE + L Sbjct: 566 ANPFYIKLLN--RDKRREEVQL 585 >ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1| predicted protein [Populus trichocarpa] Length = 657 Score = 93.6 bits (231), Expect = 1e-17 Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%) Frame = -1 Query: 276 LDKLSLEEESGNG-MSFANVVRGQQKHDVARTFSALLQLV-NNRNVDLERGECDAQPVCY 103 +DKLSLE +S M+F +VV+GQ+KHDVARTFSALLQLV NN VD +R + + + CY Sbjct: 529 VDKLSLETDSKKYVMAFTDVVKGQEKHDVARTFSALLQLVVNNGEVDFDRSQANTESFCY 588 Query: 102 TAVNPFYVRLLSHVNDQKRESLGLGRE 22 TAVNPF+VRLLSH +Q+ L ++ Sbjct: 589 TAVNPFHVRLLSHKKEQEGRQFQLSKK 615