BLASTX nr result

ID: Coptis25_contig00033463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033463
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
emb|CBI22967.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...    99   3e-19
ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/85 (58%), Positives = 64/85 (75%)
 Frame = -1

Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97
           +DKLSLE +S N M+F +VV+GQ+KHDVARTFSALLQLVNN  VDLER + + +  CY+A
Sbjct: 517 VDKLSLEVDSKNVMAFTDVVKGQEKHDVARTFSALLQLVNNGEVDLERSQANGESFCYSA 576

Query: 96  VNPFYVRLLSHVNDQKRESLGLGRE 22
           VNPF VRLL H  DQ+     + ++
Sbjct: 577 VNPFNVRLLGHKKDQEGRQFQMSKK 601


>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/80 (63%), Positives = 64/80 (80%)
 Frame = -1

Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97
           LDKLSLE    N MSFA+VV+GQ+KHDVARTFSALLQLVNN +V+LER       VCYTA
Sbjct: 514 LDKLSLEANGENVMSFADVVKGQEKHDVARTFSALLQLVNNGDVNLERSGVGGMSVCYTA 573

Query: 96  VNPFYVRLLSHVNDQKRESL 37
           +NPF+++LL+H  D++R+ L
Sbjct: 574 MNPFHIQLLNH--DKRRKDL 591


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/82 (59%), Positives = 65/82 (79%)
 Frame = -1

Query: 276  LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97
            L+KLS + E+GN MSF+ VV GQ+KHDVAR+FSALLQLVNN +V+L+RG  D + VCYT 
Sbjct: 1121 LEKLSHKAENGNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTD 1180

Query: 96   VNPFYVRLLSHVNDQKRESLGL 31
             NPFY++LL+   D++RE + L
Sbjct: 1181 ANPFYIKLLN--RDKRREEVQL 1200


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/82 (59%), Positives = 65/82 (79%)
 Frame = -1

Query: 276 LDKLSLEEESGNGMSFANVVRGQQKHDVARTFSALLQLVNNRNVDLERGECDAQPVCYTA 97
           L+KLS + E+GN MSF+ VV GQ+KHDVAR+FSALLQLVNN +V+L+RG  D + VCYT 
Sbjct: 506 LEKLSHKAENGNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTD 565

Query: 96  VNPFYVRLLSHVNDQKRESLGL 31
            NPFY++LL+   D++RE + L
Sbjct: 566 ANPFYIKLLN--RDKRREEVQL 585


>ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
 Frame = -1

Query: 276 LDKLSLEEESGNG-MSFANVVRGQQKHDVARTFSALLQLV-NNRNVDLERGECDAQPVCY 103
           +DKLSLE +S    M+F +VV+GQ+KHDVARTFSALLQLV NN  VD +R + + +  CY
Sbjct: 529 VDKLSLETDSKKYVMAFTDVVKGQEKHDVARTFSALLQLVVNNGEVDFDRSQANTESFCY 588

Query: 102 TAVNPFYVRLLSHVNDQKRESLGLGRE 22
           TAVNPF+VRLLSH  +Q+     L ++
Sbjct: 589 TAVNPFHVRLLSHKKEQEGRQFQLSKK 615


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