BLASTX nr result

ID: Coptis25_contig00033436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033436
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   269   3e-70
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              269   3e-70
ref|XP_003551665.1| PREDICTED: origin recognition complex subuni...   244   7e-63
ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_002511876.1| conserved hypothetical protein [Ricinus comm...   239   2e-61

>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  269 bits (688), Expect = 3e-70
 Identities = 129/203 (63%), Positives = 163/203 (80%)
 Frame = +2

Query: 2   MIYLIFDNMELVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPI 181
           MIYLIFDN+ELVR+WDK+S ++  LF+L+DIL MPEVGLIFIS  SPD Y+   G +EPI
Sbjct: 189 MIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPI 248

Query: 182 PIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCE 361
           PI FPDYTED L QIF+RNQ +PKLYSSFLDVVL+   +ITR +DELS  F PL++KYCE
Sbjct: 249 PILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCE 308

Query: 362 PLSDSGRVPNQNMKSKLYVHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKRNTRVLG 541
           PLSD G VPN++MK KL+ HL+PH+ P+LNE+FKV S  +PE++A +EK+++K N   LG
Sbjct: 309 PLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRKSNANKLG 368

Query: 542 DGEAHEDLDIHMSVSAKYLLISA 610
             EA +++D HMS SAKYL+ISA
Sbjct: 369 GREAFDEIDFHMSTSAKYLIISA 391


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  269 bits (688), Expect = 3e-70
 Identities = 129/203 (63%), Positives = 163/203 (80%)
 Frame = +2

Query: 2   MIYLIFDNMELVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPI 181
           MIYLIFDN+ELVR+WDK+S ++  LF+L+DIL MPEVGLIFIS  SPD Y+   G +EPI
Sbjct: 172 MIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSDRGYVEPI 231

Query: 182 PIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCE 361
           PI FPDYTED L QIF+RNQ +PKLYSSFLDVVL+   +ITR +DELS  F PL++KYCE
Sbjct: 232 PILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSPLFKKYCE 291

Query: 362 PLSDSGRVPNQNMKSKLYVHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKRNTRVLG 541
           PLSD G VPN++MK KL+ HL+PH+ P+LNE+FKV S  +PE++A +EK+++K N   LG
Sbjct: 292 PLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRKSNANKLG 351

Query: 542 DGEAHEDLDIHMSVSAKYLLISA 610
             EA +++D HMS SAKYL+ISA
Sbjct: 352 GREAFDEIDFHMSTSAKYLIISA 374


>ref|XP_003551665.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 541

 Score =  244 bits (624), Expect = 7e-63
 Identities = 123/205 (60%), Positives = 153/205 (74%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2   MIYLIFDNMELVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPI 181
           MIYL+FDN +LVR+WDK+S ++ LLF L+D+L MPEVGLIFIS++SPDT++ + G +EPI
Sbjct: 188 MIYLVFDNFQLVREWDKSSTILPLLFNLYDLLNMPEVGLIFISSTSPDTFYSNMGYVEPI 247

Query: 182 PIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCE 361
           PI+FPDYTE+++ QI LRNQ + KLYSSFLDV LK  C IT+ ID LS   KPLYEKYCE
Sbjct: 248 PIYFPDYTEEDIRQILLRNQVNQKLYSSFLDVSLKSFCGITKQIDHLSAALKPLYEKYCE 307

Query: 362 PLSDSGR--VPNQNMKSKLYVHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKRNTRV 535
           PLSD G+   PNQ MK +L  H+ PH+  SLNE+FKV S  + E++  KE+ RK  N R 
Sbjct: 308 PLSDKGKGVAPNQEMKRRLLAHINPHIASSLNEIFKVSSLSSTEVEIRKEEKRKGNNRR- 366

Query: 536 LGDGEAHEDLDIHMSVSAKYLLISA 610
           L   E    LD H+S SAKYLLISA
Sbjct: 367 LEQSEELGSLDFHVSTSAKYLLISA 391


>ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  241 bits (614), Expect = 1e-61
 Identities = 116/203 (57%), Positives = 152/203 (74%)
 Frame = +2

Query: 2   MIYLIFDNMELVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPI 181
           M+YLIFDN+EL+R+WDK+S  +  +F L+D+LKM EVGLIFISN+SPDTY+ + G  E +
Sbjct: 187 MLYLIFDNLELIREWDKSSSALPFMFNLYDVLKMHEVGLIFISNTSPDTYYSNMGYTEHV 246

Query: 182 PIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCE 361
           P++FP+YTED+L QI +RNQ + KLYSSFLDVVL+  C+ TR +DELS  F PL+ KYCE
Sbjct: 247 PVYFPEYTEDDLRQILMRNQANRKLYSSFLDVVLRPFCRTTRRVDELSTAFSPLFRKYCE 306

Query: 362 PLSDSGRVPNQNMKSKLYVHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKRNTRVLG 541
           PLSD   VPN+ MK +L+ H +PH+ PSLNE+F VPS  + E + NK+  R+K +TR   
Sbjct: 307 PLSDLASVPNEEMKRRLFSHFQPHIAPSLNEIFWVPSKSSTEAEINKD-TRQKGSTRKSE 365

Query: 542 DGEAHEDLDIHMSVSAKYLLISA 610
             +    +D HMS SAKYLLISA
Sbjct: 366 VSDHFAQIDFHMSTSAKYLLISA 388


>ref|XP_002511876.1| conserved hypothetical protein [Ricinus communis]
           gi|223549056|gb|EEF50545.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 547

 Score =  239 bits (611), Expect = 2e-61
 Identities = 118/203 (58%), Positives = 153/203 (75%)
 Frame = +2

Query: 2   MIYLIFDNMELVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLSTGSLEPI 181
           M+YLIFDN+ELVR WDK+S M+  LF L+D+LKMPEVGLI+ISN+SPDT++ + G +EPI
Sbjct: 185 MLYLIFDNLELVRTWDKSSTMLPFLFCLYDLLKMPEVGLIYISNTSPDTFYSNLGFIEPI 244

Query: 182 PIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPLYEKYCE 361
           P++FP+YTE+++ QIFLRNQ + KLYS FLDVVLK  C+ TR +DELS  F  L+ KYCE
Sbjct: 245 PVYFPEYTEEDIRQIFLRNQENRKLYSCFLDVVLKPFCRTTRRMDELSTGFTSLFRKYCE 304

Query: 362 PLSDSGRVPNQNMKSKLYVHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKRNTRVLG 541
           PL D   VPN+ MK +L+   +PH+  SLNEVF VPS  + E+++NKE+  K R     G
Sbjct: 305 PLRDLEHVPNEEMKRRLFSRFQPHIASSLNEVFSVPSQTSVEVESNKEEKHKCRKRNPEG 364

Query: 542 DGEAHEDLDIHMSVSAKYLLISA 610
           + +  E +D HMS SAKYLLISA
Sbjct: 365 EADFAE-VDFHMSTSAKYLLISA 386


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