BLASTX nr result

ID: Coptis25_contig00033396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033396
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    77   2e-12
emb|CBI35900.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    65   6e-09
ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]          65   6e-09
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -1

Query: 184  LISQSTCLMYSDEWIKLWFSIEKIYRRVTDCADLWEIEKKNFGKRRALSDLLKLLESCGL 5
            L S S CL+Y + W ++  ++E + R VT+CADLW+   KN GKRRALS+LLKLLESCGL
Sbjct: 3899 LASPSPCLVYLEHWREVRSTLEHVCRTVTECADLWKDVSKNLGKRRALSELLKLLESCGL 3958

Query: 4    S 2
            S
Sbjct: 3959 S 3959


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 46/61 (75%)
 Frame = -1

Query: 184  LISQSTCLMYSDEWIKLWFSIEKIYRRVTDCADLWEIEKKNFGKRRALSDLLKLLESCGL 5
            L S S CL+Y + W ++  ++E + R VT+CADLW+   KN GKRRALS+LLKLLESCGL
Sbjct: 3899 LSSPSPCLVYLEHWREVRSTLEHVCRTVTECADLWKDVSKNLGKRRALSELLKLLESCGL 3958

Query: 4    S 2
            S
Sbjct: 3959 S 3959


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/59 (54%), Positives = 42/59 (71%)
 Frame = -1

Query: 178  SQSTCLMYSDEWIKLWFSIEKIYRRVTDCADLWEIEKKNFGKRRALSDLLKLLESCGLS 2
            SQS  L Y +EW  L  ++E+IY+R   C  +W+  KK+ GKRRALS+LLKLLE+ GLS
Sbjct: 4054 SQSQSLSYQEEWKSLSCTVERIYQRACYCDVIWKESKKSQGKRRALSELLKLLETSGLS 4112


>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
          Length = 5062

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/59 (54%), Positives = 42/59 (71%)
 Frame = -1

Query: 178  SQSTCLMYSDEWIKLWFSIEKIYRRVTDCADLWEIEKKNFGKRRALSDLLKLLESCGLS 2
            SQS  L Y +EW  L  ++E+IY+R   C  +W+  KK+ GKRRALS+LLKLLE+ GLS
Sbjct: 3685 SQSQSLSYQEEWKSLSCTVERIYQRACYCDVIWKESKKSQGKRRALSELLKLLETSGLS 3743


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = -1

Query: 214  KDTEGFIRLSLISQSTCLMYSDEWIKLWFSIEKIYRRVTDCADLWEIEKKNFGKRRALSD 35
            KD     R  L S S+ L   ++W  L +++EKI++   DC DLW    K  GK+RALS+
Sbjct: 3936 KDVTSITRQCLASHSSHLSRDEQWNVLCWTVEKIFKTAMDCDDLWNDTGKGVGKKRALSE 3995

Query: 34   LLKLLESCGL 5
            LLKLL++ GL
Sbjct: 3996 LLKLLDTSGL 4005


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