BLASTX nr result

ID: Coptis25_contig00033384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033384
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH54097.1| SFBB22-alpha [Pyrus x bretschneideri]                   60   2e-07
dbj|BAF47181.1| PpSFBB4-alpha [Pyrus pyrifolia]                        59   4e-07
gb|ADE43174.1| SFBBbeta protein [Malus x domestica]                    59   5e-07
dbj|BAK69464.1| S-locus F-box brothers6-S6 [Pyrus pyrifolia]           58   7e-07
gb|ADE43199.1| SFBBalpha protein [Pyrus x bretschneideri]              58   7e-07

>gb|ACH54097.1| SFBB22-alpha [Pyrus x bretschneideri]
          Length = 392

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   IVEIFSRVPPKSVVRFRCLSKSWCNSLSDPNFIKTHLSHAIAEDKLNIF 148
           +VEI SR+PPKS++RF+C+ KSWC  ++ P+F+  HLS+ + +DK + F
Sbjct: 14  VVEILSRLPPKSLMRFKCVHKSWCTIINSPSFVAKHLSNTV-DDKFSSF 61


>dbj|BAF47181.1| PpSFBB4-alpha [Pyrus pyrifolia]
          Length = 392

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/49 (46%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   IVEIFSRVPPKSVVRFRCLSKSWCNSLSDPNFIKTHLSHAIAEDKLNIF 148
           +VEI SR+PPKS++RF+C+ KSWC  ++ P+F+  HLS+ + ++K + F
Sbjct: 14  VVEILSRLPPKSLIRFKCVRKSWCTIINSPSFVAKHLSNTV-DNKFSSF 61


>gb|ADE43174.1| SFBBbeta protein [Malus x domestica]
          Length = 397

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 21/41 (51%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   IVEIFSRVPPKSVVRFRCLSKSWCNSLSDPNFIKTHLSHAI 124
           + EI SR+PPKS++RF+C+SKSWC  +++P+F+  HLS+++
Sbjct: 14  VAEILSRLPPKSLMRFKCISKSWCTVINNPSFMAKHLSNSV 54


>dbj|BAK69464.1| S-locus F-box brothers6-S6 [Pyrus pyrifolia]
          Length = 392

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/49 (46%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   IVEIFSRVPPKSVVRFRCLSKSWCNSLSDPNFIKTHLSHAIAEDKLNIF 148
           +VEI SR+PPKS++RF+C+ KSWC  ++ P+F+  HLS+ + ++K + F
Sbjct: 14  VVEILSRLPPKSLMRFKCVHKSWCTIINSPSFVAKHLSNTV-DNKFSSF 61


>gb|ADE43199.1| SFBBalpha protein [Pyrus x bretschneideri]
          Length = 392

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/49 (46%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   IVEIFSRVPPKSVVRFRCLSKSWCNSLSDPNFIKTHLSHAIAEDKLNIF 148
           +VEI SR+PPKS++RF+C+ KSWC  ++ P+F+  HLS+ + ++K + F
Sbjct: 14  VVEILSRLPPKSLMRFKCVHKSWCTIINSPSFVAKHLSNTV-DNKFSSF 61


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