BLASTX nr result

ID: Coptis25_contig00033371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033371
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex...    89   3e-16
ref|NP_001068095.1| Os11g0557900 [Oryza sativa Japonica Group] g...    89   3e-16
gb|ABA94290.1| Actin polymerization factor, putative, expressed ...    89   3e-16

>ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|222835188|gb|EEE73623.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = -3

Query: 263 YLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTINTV 132
           YLYRGL+TGDRPTC+QCLRIHEKLTEKAGLGCILRSL+DT+NTV
Sbjct: 94  YLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRSLADTVNTV 137


>ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|222844214|gb|EEE81761.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/44 (88%), Positives = 44/44 (100%)
 Frame = -3

Query: 263 YLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTINTV 132
           YLYRGL+TGDRPTC+QCLRIHEKLTEKAG+GCILRSL+DT+NTV
Sbjct: 94  YLYRGLSTGDRPTCDQCLRIHEKLTEKAGMGCILRSLADTVNTV 137


>ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like
           [Cucumis sativus] gi|449495272|ref|XP_004159784.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           5-like [Cucumis sativus]
          Length = 135

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/44 (88%), Positives = 44/44 (100%)
 Frame = -3

Query: 263 YLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTINTV 132
           YLYRGL+TGDRPTC+QCLRIHEKLTE+AGLGCILRSL+DT+NTV
Sbjct: 92  YLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTVNTV 135


>ref|NP_001068095.1| Os11g0557900 [Oryza sativa Japonica Group]
           gi|77551492|gb|ABA94289.1| Actin polymerization factor,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113645317|dbj|BAF28458.1| Os11g0557900 [Oryza sativa
           Japonica Group] gi|215693221|dbj|BAG88603.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218185926|gb|EEC68353.1| hypothetical protein
           OsI_36484 [Oryza sativa Indica Group]
          Length = 137

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/44 (88%), Positives = 44/44 (100%)
 Frame = -3

Query: 263 YLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTINTV 132
           YLYRGL+TGDRPTC+QCL+IHEKLTEKAGLGCILRSL+DT+NTV
Sbjct: 94  YLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLADTVNTV 137


>gb|ABA94290.1| Actin polymerization factor, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 68

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/44 (88%), Positives = 44/44 (100%)
 Frame = -3

Query: 263 YLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTINTV 132
           YLYRGL+TGDRPTC+QCL+IHEKLTEKAGLGCILRSL+DT+NTV
Sbjct: 25  YLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLADTVNTV 68


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