BLASTX nr result

ID: Coptis25_contig00033364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033364
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43
ref|XP_002510717.1| pentatricopeptide repeat-containing protein,...   160   2e-37
ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36

>ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  180 bits (456), Expect = 1e-43
 Identities = 91/138 (65%), Positives = 102/138 (73%), Gaps = 3/138 (2%)
 Frame = -3

Query: 406 MKACGT---IPNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNV 236
           MK C +   IP A+KLHA LI  G  SSIFLQNHLLNMYS CGL+ DA  VF  I   NV
Sbjct: 1   MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60

Query: 235 FSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRD 56
           +SWNTMISG ADSG+M+EA KLF++M ERD VSWNSMMSGYF NGE   T+ VF  M+RD
Sbjct: 61  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120

Query: 55  FSCEPDPFSLSCVLKACG 2
             C PDPFS SCV+KA G
Sbjct: 121 CCCVPDPFSFSCVMKASG 138



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 3/175 (1%)
 Frame = -3

Query: 520 LVRYIYQESHAKESMNSLYLNFSKQKPYMEFSKTLSEAMKACGT---IPNAQKLHAHLIS 350
           L+  + Q    +E++  +  N  ++ P      TL+  +  C +   I   ++LHAH I+
Sbjct: 331 LIGGVAQAGFQEEAL--VLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTIT 388

Query: 349 TGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGRMKEARKL 170
            G  SS+ + N L+ MY+KCG V  A   FE +  R++ SW  MI+  + +G +++AR+ 
Sbjct: 389 RGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREY 448

Query: 169 FDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRDFSCEPDPFSLSCVLKAC 5
           FD+M ER+ +SWNSM++ Y Q G   E L V+  M+R+   + D  + S  + AC
Sbjct: 449 FDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLRE-GVKTDWITFSTSISAC 502



 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
 Frame = -3

Query: 421 TLSEAMKACGTIPN---AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           + S  MKA G++     A +LH       F     ++  +L+MY KCG +D A  VF   
Sbjct: 129 SFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRT 188

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFA 71
              ++F WN+MI G +  G +K+A +LF +M ERD VSWN+M+S   Q+G   ETLN F 
Sbjct: 189 PNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTF- 247

Query: 70  LMMRDFSCEPDPFSLSCVLKAC 5
           L M +    P+  + + VL AC
Sbjct: 248 LEMWNQGFRPNSMTYASVLSAC 269



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
 Frame = -3

Query: 520 LVRYIYQESHAKESMNSLYLNFSKQKPYMEFSKTLSEAMKACGTIPNAQ---KLHAHLIS 350
           ++  + Q     E++N+ +L    Q  +   S T +  + AC +I + +    LHA ++ 
Sbjct: 230 MISILSQHGFGAETLNT-FLEMWNQG-FRPNSMTYASVLSACTSIYDLEWGAHLHARIVR 287

Query: 349 TGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGRMKEARKL 170
                 ++    L++MY+KCG ++ A  VF+ + E N  SW ++I G+A +G  +EA  L
Sbjct: 288 MEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVL 347

Query: 169 FDEMGE 152
           F++M E
Sbjct: 348 FNQMRE 353



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
 Frame = -3

Query: 421 TLSEAMKACGTIPN---AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           T S ++ AC  +       ++ A     GF+S++ + N ++ MYS+CG +++A  +F  I
Sbjct: 494 TFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 553

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEM----GERDCVSWNSMMSGYFQNGESGETL 83
             +N+ SWN M++G A +G+ ++  ++F++M       D +S+ S++S     G +G+ L
Sbjct: 554 VMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSDLL--GRAGQ-L 610

Query: 82  NVFALMMRDFSCEPDPFSLSCVLKAC 5
                ++     +P+      +L AC
Sbjct: 611 EQAKNLINQMPFKPNAAIWGALLAAC 636


>ref|XP_002510717.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551418|gb|EEF52904.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 742

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/135 (57%), Positives = 100/135 (74%)
 Frame = -3

Query: 406 MKACGTIPNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSW 227
           M  C ++P A+KLHA LISTG   SIFL NHLLNMY  C L  DA  VF ++  RNVFS+
Sbjct: 1   MGHCSSMPIARKLHAQLISTGLYISIFLHNHLLNMYLNCHLTHDACRVFADMTFRNVFSY 60

Query: 226 NTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRDFSC 47
           NTMI+GL+ + ++ +A+K+FDEM ERD VSWNSMMSGYF+NG+  E + VF LM+R+F+C
Sbjct: 61  NTMITGLSKAEQIDKAKKVFDEMPERDSVSWNSMMSGYFRNGKYEEVVKVFVLMIRNFTC 120

Query: 46  EPDPFSLSCVLKACG 2
             +  S SC +KACG
Sbjct: 121 IVNLLSFSCAMKACG 135



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = -3

Query: 421 TLSEAMKACGTIPN----AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEE 254
           T +  +K C   PN     ++LHA    TG  S + + N L+ MYSKCG    A  VF+ 
Sbjct: 359 TFATVLKVCSH-PNFNFTGRQLHALTTKTGMGSIVTVGNALITMYSKCGDTQKADCVFKM 417

Query: 253 IEERNVFSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVF 74
           +  RN+ SW +MI+  + +G  ++A+  F++M ER+ ++WNSM+S Y Q+G     L ++
Sbjct: 418 MPVRNIISWTSMITAFSQAGYFRKAQACFNKMPERNVITWNSMISMYIQHGFQEWGLKLY 477

Query: 73  ALMMRDFSCEPDPFSLSCVLKAC 5
             M R+    PD  + +  + AC
Sbjct: 478 VRMQRE-RIAPDDITFATSISAC 499



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
 Frame = -3

Query: 538 KTTQQQLVRYIYQESHAKESM--NSLYLNFSKQKPYMEFSK----------------TLS 413
           K  Q    + ++ E   ++S+  NS+   + +   Y E  K                + S
Sbjct: 69  KAEQIDKAKKVFDEMPERDSVSWNSMMSGYFRNGKYEEVVKVFVLMIRNFTCIVNLLSFS 128

Query: 412 EAMKACGTI---PNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEER 242
            AMKACG +     A +LH       F S   ++  ++ MY KCG    A  VF  I + 
Sbjct: 129 CAMKACGALGCFKLAIQLHGLFEKFDFGSDKSIETSVMGMYIKCGAFTYADRVFLGIRQP 188

Query: 241 NVFSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMM 62
           ++F +N+M+   ++S  + +A  LF+ + ERD VSW++++S   ++G    TL++F  M 
Sbjct: 189 SLFCFNSMLYCYSNSYGVGKALDLFNRIPERDSVSWSTIISILSRHGFGVPTLSMFIEMW 248

Query: 61  RDFSCEPDPFSLSCVLKAC 5
                 P+  + +CVL AC
Sbjct: 249 TQ-GFRPNSMTFACVLSAC 266



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = -3

Query: 421 TLSEAMKACGTIPNAQ---KLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           T + ++ AC  +   +   ++ A     GF S + + N L+ MYS+CG +++A   F+ +
Sbjct: 491 TFATSISACADLAMLKLGNQIVAQAEKLGFGSDVSVANSLVTMYSRCGQIEEARKAFDLV 550

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEMGER----DCVSWNSMMS 119
             +N+ SWN+MI+G A +G  + A ++F  M E     D +S+ S++S
Sbjct: 551 SMKNLVSWNSMIAGYAQNGHGRVAIEVFKNMLEMEYIPDHISYLSVLS 598



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
 Frame = -3

Query: 427 SKTLSEAMKACGTIPNAQ---KLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFE 257
           S T +  + AC +I + +    LHA +I        ++ N L+ MY+KCG +  A  VF 
Sbjct: 256 SMTFACVLSACTSIHDLEWGAHLHARIIRKEIILDDYVGNGLVYMYAKCGHLKFARRVFN 315

Query: 256 EIEERNVFSWNTMISGLADSGRMKEARKLFDEMGE 152
            + E N  SW ++I+G+A  G  +EA  LF++M E
Sbjct: 316 SLTEHNAVSWTSLINGVARCGLKEEALLLFNKMRE 350


>ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 948

 Score =  155 bits (393), Expect = 3e-36
 Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
 Frame = -3

Query: 439 YMEFSKTLSEAMKACGTIPNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVF 260
           YM+ S+   +A K CG+ P A+KLHA LI +G  +S+FL N+LL+MYS CG+VDDA  VF
Sbjct: 3   YMQLSQKFYDAFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVF 62

Query: 259 EEIEERNVFSWNTMISGLADSGRMKEARKLFDEMGE--RDCVSWNSMMSGYFQNGESGET 86
            E    N+F+WNTM+    DSGRM+EA  LFDEM    RD VSW +M+SGY QNG    +
Sbjct: 63  REANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHS 122

Query: 85  LNVFALMMRDFSCE---PDPFSLSCVLKACG 2
           +  F  M+RD + +    DPFS +C +KACG
Sbjct: 123 IKTFMSMLRDSNHDIQNCDPFSYTCTMKACG 153



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/122 (35%), Positives = 72/122 (59%)
 Frame = -3

Query: 370 LHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGR 191
           LH + I  G  SS+ + N ++ MY++CG  + A L F  +  R+  SW  MI+  + +G 
Sbjct: 397 LHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGD 456

Query: 190 MKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRDFSCEPDPFSLSCVLK 11
           +  AR+ FD   ER+ ++WNSM+S Y Q+G S E + ++ L MR  + +PD  + +  ++
Sbjct: 457 IDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVL-MRSKAVKPDWVTFATSIR 515

Query: 10  AC 5
           AC
Sbjct: 516 AC 517



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
 Frame = -3

Query: 406 MKACGTIPN---AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNV 236
           MKACG + +   A +LHAH+I     +   +QN L++MY KCG +  A  VF  IE  ++
Sbjct: 149 MKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSL 208

Query: 235 FSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRD 56
           F WN+MI G +      EA  +F  M + D VSWN+++S + Q G     L+ + + M +
Sbjct: 209 FCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTY-VEMCN 267

Query: 55  FSCEPDPFSLSCVLKAC 5
              +P+  +   VL AC
Sbjct: 268 LGFKPNFMTYGSVLSAC 284



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
 Frame = -3

Query: 535 TTQQQLVRYIYQESHAKESMNSLYLNFSKQ-KPYMEFSKTLSEAMKACGTIPNAQKLHAH 359
           T    L  YI Q   ++E M    L  SK  KP      T   A     TI    ++ +H
Sbjct: 474 TWNSMLSTYI-QHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSH 532

Query: 358 LISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGRMKEA 179
           +   G +S + + N ++ MYS+CG + +A  VF+ I  +N+ SWN M++  A +G   +A
Sbjct: 533 VTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKA 592

Query: 178 RKLFDEMGERDC 143
            + +++M   +C
Sbjct: 593 IETYEDMLRTEC 604



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -3

Query: 421 TLSEAMKACGTIPNAQ---KLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           T    + AC +I + +    LHA ++    +   FL + L++MY+KCG +  A  VF  +
Sbjct: 276 TYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSL 335

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEMGERDCV 140
            E+N  SW  +ISG+A  G   +A  LF++M +   V
Sbjct: 336 GEQNQVSWTCLISGVAQFGLGDDALALFNQMRQASVV 372


>ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  155 bits (392), Expect = 4e-36
 Identities = 77/151 (50%), Positives = 101/151 (66%), Gaps = 5/151 (3%)
 Frame = -3

Query: 439 YMEFSKTLSEAMKACGTIPNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVF 260
           YM+ S+   +A K CG+ P A+KLHA LI +G  +S+FL N+LL+MYS CG+VDDA  VF
Sbjct: 3   YMQLSQKFYDAFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVF 62

Query: 259 EEIEERNVFSWNTMISGLADSGRMKEARKLFDEMGE--RDCVSWNSMMSGYFQNGESGET 86
            E    N+F+WNTM+    DSGRM+EA  LFDEM    RD VSW +M+SGY QNG    +
Sbjct: 63  REANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHS 122

Query: 85  LNVFALMMRDFSCE---PDPFSLSCVLKACG 2
           +  F  M+RD + +    DPFS +C +KACG
Sbjct: 123 IKTFMSMLRDSNHDIQNCDPFSYTCTMKACG 153



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/122 (35%), Positives = 73/122 (59%)
 Frame = -3

Query: 370 LHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGR 191
           LH + I +G  S + + N ++ MY++CG  + A L F  +  R+  SW  MI+  + +G 
Sbjct: 397 LHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGD 456

Query: 190 MKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRDFSCEPDPFSLSCVLK 11
           +  AR+ FD M ER+ ++WNSM+S Y Q+G S E + ++ L MR  + +PD  + +  ++
Sbjct: 457 IDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVL-MRSKAVKPDWVTFATSIR 515

Query: 10  AC 5
           AC
Sbjct: 516 AC 517



 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
 Frame = -3

Query: 406 MKACGTIPN---AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNV 236
           MKACG + +   A +LHAH+I     +   +QN L++MY KCG +  A  VF  IE  ++
Sbjct: 149 MKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSL 208

Query: 235 FSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRD 56
           F WN+MI G +      EA  +F  M ERD VSWN+++S + Q G     L+ F + M +
Sbjct: 209 FCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTF-VEMCN 267

Query: 55  FSCEPDPFSLSCVLKAC 5
              +P+  +   VL AC
Sbjct: 268 LGFKPNFMTYGSVLSAC 284



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
 Frame = -3

Query: 535 TTQQQLVRYIYQESHAKESMNSLYLNFSKQ-KPYMEFSKTLSEAMKACGTIPNAQKLHAH 359
           T    L  YI Q   ++E M    L  SK  KP      T   A     TI    ++ +H
Sbjct: 474 TWNSMLSTYI-QHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSH 532

Query: 358 LISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGRMKEA 179
           +   G +S + + N ++ MYS+CG + +A  VF+ I  +N+ SWN M++  A +G   +A
Sbjct: 533 VTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKA 592

Query: 178 RKLFDEMGERDC 143
            + +++M   +C
Sbjct: 593 IETYEDMLRTEC 604



 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
 Frame = -3

Query: 421 TLSEAMKACGTIPNAQ---KLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           T    + AC +I + +    LHA ++    +   FL + L++MY+KCG +  A  VF  +
Sbjct: 276 TYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSL 335

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEMGERDCV 140
            E+N  SW  +ISG+A  G   +A  LF++M +   V
Sbjct: 336 GEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVV 372


>ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 921

 Score =  155 bits (392), Expect = 4e-36
 Identities = 77/151 (50%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
 Frame = -3

Query: 439 YMEFSKTLSEAMKACGTIPNAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVF 260
           YM+ S+   +A K CG+ P A+KLHA LI +G  +S+FL N+LL++YS CG+VDDA  VF
Sbjct: 3   YMQLSQKFYDAFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVF 62

Query: 259 EEIEERNVFSWNTMISGLADSGRMKEARKLFDEMG--ERDCVSWNSMMSGYFQNGESGET 86
            E    N+F+WNTM+    DSGRM+EA  LFDEM    RD VSW +M+SGY QNG  G +
Sbjct: 63  REANHANIFTWNTMLHAFFDSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHS 122

Query: 85  LNVFALMMRDFSCE---PDPFSLSCVLKACG 2
           +  F  M+RD + +    DPFS +C +KACG
Sbjct: 123 IKTFMSMLRDSNHDIQNCDPFSYTCTMKACG 153



 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 44/126 (34%), Positives = 76/126 (60%)
 Frame = -3

Query: 382 NAQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLA 203
           + + LH + I +G  SS+ + N ++ MY++CG  + A L F  +  R+  SW  MI+  +
Sbjct: 393 SGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFS 452

Query: 202 DSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRDFSCEPDPFSLS 23
            +G +  AR+ FD M ER+ ++WNSM+S Y Q+G S E + ++ L MR  + +PD  + +
Sbjct: 453 QNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVL-MRSKAVKPDWVTFA 511

Query: 22  CVLKAC 5
             ++AC
Sbjct: 512 TSIRAC 517



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
 Frame = -3

Query: 406 MKACGTIPN---AQKLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNV 236
           MKACG + +   A +LHAH+I     +   +QN L++MY KCG +  A  +F  IE  ++
Sbjct: 149 MKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSL 208

Query: 235 FSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYFQNGESGETLNVFALMMRD 56
           F WN+MI G +      EA  +F  M ERD VSWN+++S + Q G     L+ F + M +
Sbjct: 209 FCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTF-VEMCN 267

Query: 55  FSCEPDPFSLSCVLKAC 5
              +P+  +   VL AC
Sbjct: 268 LGFKPNFMTYGSVLSAC 284



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
 Frame = -3

Query: 535  TTQQQLVRYIYQESHAKESMNSLYLNFSKQ-KPYMEFSKTLSEAMKACGTIPNAQKLHAH 359
            T    L  YI Q   ++E M    L  SK  KP      T   A     TI    ++ +H
Sbjct: 474  TWNSMLSTYI-QHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSH 532

Query: 358  LISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEIEERNVFSWNTMISGLADSGRMKEA 179
            +   G +S + + N ++ MYS+CG + +A  VF+ I  +N+ SWN M++  A +G   +A
Sbjct: 533  VTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKA 592

Query: 178  RKLFDEMGERDC----VSWNSMMSGYFQNGESGETLNVFALMMRDFSCEPDPFSLSCVLK 11
             + ++ M   +C    +S+ +++S     G +G  LN    ++     +P+      +L 
Sbjct: 593  IETYEAMLRTECKPDHISYVAVLSDLL--GRAG-LLNQAKNLIDGMPFKPNATVWGALLG 649

Query: 10   AC 5
            AC
Sbjct: 650  AC 651



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
 Frame = -3

Query: 421 TLSEAMKACGTIPNAQ---KLHAHLISTGFASSIFLQNHLLNMYSKCGLVDDAILVFEEI 251
           T    + AC +I + +    LHA ++    +   FL + L++MY+KCG +  A  VF  +
Sbjct: 276 TYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSL 335

Query: 250 EERNVFSWNTMISGLADSGRMKEARKLFDEMGERDCVSWNSMMSGYF-----QN-GESGE 89
            E+N  SW   ISG+A  G   +A  LF++M +   V     ++        QN   SGE
Sbjct: 336 GEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAASGE 395

Query: 88  TLNVFALMMRDFSCEPDPFSLSCVLKACG 2
            L+ +A+     S  P   ++  +   CG
Sbjct: 396 LLHGYAIKSGMDSSVPVGNAIITMYARCG 424


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