BLASTX nr result

ID: Coptis25_contig00033355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033355
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    63   2e-08
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    62   4e-08
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]    62   4e-08
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
 Frame = -1

Query: 378 LTGTVLTCISMGFLMPSLGVNSESECLTNLVALSIFVVTLGVNICIQIYTGVIVLFVVEH 199
           L+ TV  C  MG  MPSLG+   ++ L NL+AL I V+T  VNICIQ+ TG I +F  EH
Sbjct: 93  LSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEH 152

Query: 198 XXXXXXXXXXXXXLWQMSLYIKSHKRITTDQYK---DLFLK--------GISSMFERLKC 52
                        L   +  + + KRI   +YK   D+ +K            + + L  
Sbjct: 153 FLVVLLMLLMLMILCFSATTVPTTKRILEAKYKKRYDVAMKCPLATERTVAKKIQQDLSK 212

Query: 51  CYLYAYCSNPQF 16
            ++ A+ S+PQF
Sbjct: 213 FWMMAHTSSPQF 224


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 378 LTGTVLTCISMGFLMPSLGVNSESECLTNLVALSIFVVTLGVNICIQIYTGVIVLFVVEH 199
           L+ TV+ C  MG  MPS+G     E  +N++AL I V+TL VN+CIQ+ TGVI ++  EH
Sbjct: 93  LSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEH 152


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 378 LTGTVLTCISMGFLMPSLGVNSESECLTNLVALSIFVVTLGVNICIQIYTGVIVLFVVEH 199
           L+ TV+ C  MG  MPS+G     E  +N++AL I V+TL VN+CIQ+ TGVI ++  EH
Sbjct: 93  LSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEH 152


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 378 LTGTVLTCISMGFLMPSLGVNSESECLTNLVALSIFVVTLGVNICIQIYTGVIVLFVVEH 199
           L+ TVL C  MG  MPS+G     E  +N++AL I ++TL VN+CI++ TGVI +F  EH
Sbjct: 125 LSSTVLMCTVMGNFMPSIGTTENKEVFSNVIALDILMITLMVNVCIKMGTGVIYVFWKEH 184


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
 Frame = -1

Query: 378 LTGTVLTCISMGFLMPSLGVNSESECLTNLVALSIFVVTLGVNICIQIYTGVIVLFVVEH 199
           L+ TV  C  MG  MPSLG+   ++ L NL+AL I V+T  VNICIQ+ TG I +F  EH
Sbjct: 93  LSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEH 152

Query: 198 XXXXXXXXXXXXXLWQMSLYIKSHKRITTDQYK---DLFLK--------GISSMFERLKC 52
                        L   +  + + KRI   +Y    D+ +K            + + L  
Sbjct: 153 FLVVLLMLLMLMILCFSATTVPTTKRILESKYNKRYDVAMKCPLATERTVAKKIQQDLSK 212

Query: 51  CYLYAYCSNPQF 16
            ++ A+ S+PQF
Sbjct: 213 FWMMAHTSSPQF 224


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