BLASTX nr result

ID: Coptis25_contig00033349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033349
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525866.1| PREDICTED: uncharacterized protein LOC100779...    42   3e-08
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    40   4e-07
emb|CAN61717.1| hypothetical protein VITISV_011742 [Vitis vinifera]    43   6e-07
ref|XP_003516312.1| PREDICTED: uncharacterized protein LOC100777...    42   6e-07
emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]    41   6e-07

>ref|XP_003525866.1| PREDICTED: uncharacterized protein LOC100779593 [Glycine max]
          Length = 448

 Score = 42.0 bits (97), Expect(2) = 3e-08
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +3

Query: 207 VSWDFLNYIMKRMAFGARWRGWVRRCVRLAWLQAL 311
           VSW FL+Y++ R+ F  +WR W+  C++LA +  L
Sbjct: 368 VSWSFLDYMLSRLGFCLKWRKWITACLQLATILIL 402



 Score = 40.4 bits (93), Expect(2) = 3e-08
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 4   EHIGDLRPFSLFGSTYKVISKVL*IRLKKVLSRVIGNKGLLF 129
           + + D RP SL G  YKVI+K+L  RL+ VLSR+I  +   F
Sbjct: 286 QSLNDYRPISLIGCMYKVIAKLLENRLRSVLSRIIDERQSAF 327


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 40.4 bits (93), Expect(2) = 4e-07
 Identities = 18/42 (42%), Positives = 27/42 (64%)
 Frame = +1

Query: 4    EHIGDLRPFSLFGSTYKVISKVL*IRLKKVLSRVIGNKGLLF 129
            + + D RP SL G TYK+++K+L  RLKKV+  +I  +   F
Sbjct: 1881 QSLNDFRPISLIGCTYKIVAKLLSNRLKKVMPSIIDERQSAF 1922



 Score = 38.1 bits (87), Expect(2) = 4e-07
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 207  VSWDFLNYIMKRMAFGARWRGWVRRCVRLAWLQAL 311
            VSWD+L ++++RM F ++W  W+  C++ A +  L
Sbjct: 1963 VSWDYLLHMLRRMGFCSKWIQWIHGCLKSASISVL 1997


>emb|CAN61717.1| hypothetical protein VITISV_011742 [Vitis vinifera]
          Length = 851

 Score = 42.7 bits (99), Expect(2) = 6e-07
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = +1

Query: 4   EHIGDLRPFSLFGSTYKVISKVL*IRLKKVLSRVI 108
           E +GD RP SL G  YK+++KVL  RLKKV+ +V+
Sbjct: 734 EDLGDFRPISLLGGLYKLLAKVLANRLKKVIGKVV 768



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 201 LDVSWDFLNYIMKRMAFGARWRGWVRRCVRLAWLQAL 311
           LDVS    N +M++M FG +W GW+ RC+  A    L
Sbjct: 782 LDVSL-IANEVMQKMGFGEKWMGWMWRCISRAKFSVL 817


>ref|XP_003516312.1| PREDICTED: uncharacterized protein LOC100777872 [Glycine max]
          Length = 936

 Score = 41.6 bits (96), Expect(2) = 6e-07
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = +3

Query: 207 VSWDFLNYIMKRMAFGARWRGWVRRCVRLAWLQAL 311
           VSW FLNY+M RM F  RW  W+  C+  A +  L
Sbjct: 694 VSWGFLNYMMMRMGFCERWGKWIHGCLSSATISIL 728



 Score = 36.6 bits (83), Expect(2) = 6e-07
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +1

Query: 4   EHIGDLRPFSLFGSTYKVISKVL*IRLKKVLSRVIGNKGLLF 129
           + + D RP SL G  YK++SKVL  RL  VL  +I  + + F
Sbjct: 612 QSLNDYRPISLIGCVYKIMSKVLANRLALVLPHLIDERQIAF 653


>emb|CAN69899.1| hypothetical protein VITISV_029782 [Vitis vinifera]
          Length = 760

 Score = 41.2 bits (95), Expect(2) = 6e-07
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +1

Query: 4   EHIGDLRPFSLFGSTYKVISKVL*IRLKKVLSRVI 108
           E +GD RP SL GS YK ++KVL  RLKKV+ +V+
Sbjct: 51  EALGDYRPISLVGSLYKWLAKVLANRLKKVVGKVV 85



 Score = 37.0 bits (84), Expect(2) = 6e-07
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
 Frame = +3

Query: 114 QRAFVLGGKFWMWC*MANEA***SYK*NSLD-------------VSWDFLNYIMKRMAFG 254
           Q AFV G +      +ANEA   + K N  D             V W+F+  IMK+M FG
Sbjct: 89  QGAFVEGRQILDAVLIANEAIDSTLKNNESDILCKLDIEKAYDKVDWNFILTIMKKMGFG 148

Query: 255 ARWRGWVRRCV 287
            +W  W++ C+
Sbjct: 149 EKWIRWIQWCI 159


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