BLASTX nr result

ID: Coptis25_contig00033347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033347
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27934.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002279809.1| PREDICTED: uncharacterized protein LOC100264...    80   2e-13
ref|XP_002514149.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002309221.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003529080.1| PREDICTED: uncharacterized protein LOC100784...    71   1e-10

>emb|CBI27934.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/76 (48%), Positives = 46/76 (60%)
 Frame = +2

Query: 98  TVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLRVCSVGLGDGDVCME 277
           + CG+   DG++CK  P EG KRC +H+GMR+N S      E  L  C V L +G VC  
Sbjct: 486 STCGMTLGDGSICKRQPVEGNKRCWQHKGMRVNCSSSWFGSETTL--CGVLLRNGSVCSR 543

Query: 278 TPVHGRKRCEVHRGWR 325
            P HGRKRCE H+G R
Sbjct: 544 VPAHGRKRCEQHKGMR 559



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
 Frame = +2

Query: 104 CGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKE-------------------- 223
           CG+    G  CK     GRKRCE+H+GMRIN+ +  L  E                    
Sbjct: 423 CGVDLGHGIFCKRLAVAGRKRCEEHKGMRINSLISTLAGEDKSHALDMGSGFITYNNSNY 482

Query: 224 GNLRVCSVGLGDGDVCMETPVHGRKRCEVHRGWRTAAS 337
            +   C + LGDG +C   PV G KRC  H+G R   S
Sbjct: 483 NHTSTCGMTLGDGSICKRQPVEGNKRCWQHKGMRVNCS 520


>ref|XP_002279809.1| PREDICTED: uncharacterized protein LOC100264589 [Vitis vinifera]
          Length = 491

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/76 (48%), Positives = 46/76 (60%)
 Frame = +2

Query: 98  TVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLRVCSVGLGDGDVCME 277
           + CG+   DG++CK  P EG KRC +H+GMR+N S      E  L  C V L +G VC  
Sbjct: 417 STCGMTLGDGSICKRQPVEGNKRCWQHKGMRVNCSSSWFGSETTL--CGVLLRNGSVCSR 474

Query: 278 TPVHGRKRCEVHRGWR 325
            P HGRKRCE H+G R
Sbjct: 475 VPAHGRKRCEQHKGMR 490



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
 Frame = +2

Query: 89  ELNTVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKE--------------- 223
           +   +CG++ DDG  CK  P  GRKRCE+H+GMRIN+ +  L  E               
Sbjct: 349 DFTIICGVILDDGFPCKRQPVLGRKRCEEHKGMRINSLISTLAGEDKSHALDMGSGFITY 408

Query: 224 -----GNLRVCSVGLGDGDVCMETPVHGRKRCEVHRGWRTAAS 337
                 +   C + LGDG +C   PV G KRC  H+G R   S
Sbjct: 409 NNSNYNHTSTCGMTLGDGSICKRQPVEGNKRCWQHKGMRVNCS 451


>ref|XP_002514149.1| conserved hypothetical protein [Ricinus communis]
           gi|223546605|gb|EEF48103.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 499

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +2

Query: 92  LNTVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRI--NNSLLKLVKEGNLRVCSVGLGDGD 265
           L+TVCG    +G+VC   P  G KRC +H+G R+  N+   + +   +   C V L  G 
Sbjct: 415 LSTVCGATLGNGSVCSRQPVGGNKRCWQHKGKRVQSNSKTSRSLSGFDSLTCGVALQSGS 474

Query: 266 VCMETPVHGRKRCEVHRGWRTAAS 337
           VCM  PV GRKRCE H+G R + S
Sbjct: 475 VCMRAPVQGRKRCEQHKGMRVSTS 498



 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 19/94 (20%)
 Frame = +2

Query: 101 VCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLR--------------- 235
           +CGI+  D  +CK  P  G+KRCE H+GMR      K + EGN                 
Sbjct: 276 ICGIIMSDAIICKKPPVPGKKRCEVHKGMRNYACNPKPIAEGNSHYAPDLHLDSSSNDDQ 335

Query: 236 ----VCSVGLGDGDVCMETPVHGRKRCEVHRGWR 325
                C V LGDG+ C    V GRKRCE H+G R
Sbjct: 336 GKNATCGVNLGDGNFCRMEVVPGRKRCEEHKGMR 369


>ref|XP_002309221.1| predicted protein [Populus trichocarpa] gi|222855197|gb|EEE92744.1|
           predicted protein [Populus trichocarpa]
          Length = 689

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
 Frame = +2

Query: 101 VCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLR--------------- 235
           +CG +  DG  C+  P  G KRCE+H+G R+  S  K + + NL                
Sbjct: 264 ICGFIMVDGIPCRRPPVPGGKRCEEHKGRRVYGSSYKSIAQRNLHYPHGANLDSTTHNDR 323

Query: 236 ----VCSVGLGDGDVCMETPVHGRKRCEVHRGWRTAASVIR-STERKTR 367
                C V LGDG  C +  V GRKRCE H+G R   SV+  + E K R
Sbjct: 324 EHETTCGVNLGDGTFCRKQAVAGRKRCEEHKGMRVNTSVLEPAAEDKIR 372



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +2

Query: 104 CGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLR----VCSVGLGDGDVC 271
           CG++  +G+ C+  P +G KRC +H+G R+  +    V   +LR    +C V L DG VC
Sbjct: 606 CGVMLGNGSFCRRQPIQGNKRCWQHKGKRVECNFSG-VDSSSLRFDAPICEVTLRDGSVC 664

Query: 272 METPVHGRKRCEVHRGWRTAAS 337
           +  PV GRKRC+ H+G R + S
Sbjct: 665 LRAPVQGRKRCDQHKGMRVSTS 686



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 44/128 (34%)
 Frame = +2

Query: 89  ELNTVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLRV---------- 238
           E  T CG+   DGT C+     GRKRCE+H+GMR+N S+L+   E  +R+          
Sbjct: 324 EHETTCGVNLGDGTFCRKQAVAGRKRCEEHKGMRVNTSVLEPAAEDKIRMSAPSSVFNSF 383

Query: 239 ----------------------------------CSVGLGDGDVCMETPVHGRKRCEVHR 316
                                             C V LG+G  C   P+ G KRC  H+
Sbjct: 384 ADGVNNNASSKHNADSTWQCGSSNNPVKEHFPNTCGVMLGNGSFCRRQPILGNKRCWQHK 443

Query: 317 GWRTAASV 340
           G R   ++
Sbjct: 444 GQRVECNL 451


>ref|XP_003529080.1| PREDICTED: uncharacterized protein LOC100784450 [Glycine max]
          Length = 426

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
 Frame = +2

Query: 56  LKDHETKLMQAELNTVCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEGNLR 235
           ++D    + + E   +CG+   DG++C   P+E R RC +H+GMR N S  K +    + 
Sbjct: 235 VQDITGAIQEQENGKICGVALGDGSICTRPPAEKRMRCPEHKGMRTNVSTAKAIIGAPMS 294

Query: 236 ----------------------VCSVGLGDGDVCMETPVHGRKRCEVHRGWRTAASVIRS 349
                                 +C + L DG  C   PV GRKRC  H+G R  A+ I++
Sbjct: 295 ESHDLEDPPQTVVDESLTNTDYICGILLSDGSTCTRQPVKGRKRCHEHKGRRIRAASIQT 354

Query: 350 TE 355
            +
Sbjct: 355 KD 356



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 24/103 (23%)
 Frame = +2

Query: 101 VCGIVFDDGTVCKNSPSEGRKRCEKHRGMRINNSLLKLVKEG------------------ 226
           +CGI+  DG+ C   P +GRKRC +H+G RI  + ++    G                  
Sbjct: 317 ICGILLSDGSTCTRQPVKGRKRCHEHKGRRIRAASIQTKDNGYKYQNNVSNDVEDPPQTL 376

Query: 227 ------NLRVCSVGLGDGDVCMETPVHGRKRCEVHRGWRTAAS 337
                 N  +C + L DG  C   PV GRKRC  H+G R  AS
Sbjct: 377 VDESITNTNICGIILNDGSTCTRHPVKGRKRCHEHKGRRIRAS 419


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