BLASTX nr result

ID: Coptis25_contig00033346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033346
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510213.1| Protein COQ10 B, mitochondrial precursor, pu...   315   9e-84
ref|XP_002301184.1| predicted protein [Populus trichocarpa] gi|2...   315   9e-84
ref|XP_003569927.1| PREDICTED: coenzyme Q-binding protein COQ10 ...   312   1e-82
gb|EAY75988.1| hypothetical protein OsI_03911 [Oryza sativa Indi...   311   1e-82
ref|NP_001044391.1| Os01g0772400 [Oryza sativa Japonica Group] g...   311   1e-82

>ref|XP_002510213.1| Protein COQ10 B, mitochondrial precursor, putative [Ricinus communis]
            gi|223550914|gb|EEF52400.1| Protein COQ10 B,
            mitochondrial precursor, putative [Ricinus communis]
          Length = 252

 Score =  315 bits (808), Expect = 9e-84
 Identities = 162/252 (64%), Positives = 190/252 (75%), Gaps = 9/252 (3%)
 Frame = -2

Query: 1074 MPPFDSASKXXXXXXXR-NMNRSSCTSSQ--IGKYVSN-RWSSSIPGVGVPCVEKLI--- 916
            MPPF S +K         N+ +    S +    KY    R   SI G+  P V +LI   
Sbjct: 1    MPPFMSTTKALRFLTTNKNVAKGLIRSPKNPTSKYNHQIRCYDSIMGMSTPTVRELIDNY 60

Query: 915  --SNDKERIFSIRDLHQSAQIRGFLGCGDGEEGSVLSKTYEEKRVMGYTPEQLFAVVAAV 742
              +ND       R  + ++Q R FLGCGDGEEG VLSK YEE+RV+GY+PEQLF VVAAV
Sbjct: 61   NNNNDNNSCTIGRLYNNNSQKRQFLGCGDGEEGGVLSKVYEERRVLGYSPEQLFDVVAAV 120

Query: 741  DMYEDFLPWCQRSKIVRHNPDGSFDAELEIGFKFLVESYMSHVEMTKPKYIKTTASESNL 562
            D+Y  F+PWCQRS I+RH+PDGSFDAELEIGFKFLVESY+SHVE+ +PK IKTT S+S L
Sbjct: 121  DLYHGFVPWCQRSDIIRHHPDGSFDAELEIGFKFLVESYISHVELKRPKSIKTTVSDSTL 180

Query: 561  FDHLINVWEFSPGPIPGTCGLYFMVDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRCRLI 382
            FDHLIN+WEF+PGP+PGTC LYF+VDFKFQSPLYRQVAS+FFKEVVSRLVGSFS+RCRL+
Sbjct: 181  FDHLINIWEFNPGPVPGTCDLYFLVDFKFQSPLYRQVASVFFKEVVSRLVGSFSERCRLV 240

Query: 381  YGPGVQVLENSY 346
            YGPGV VLENSY
Sbjct: 241  YGPGVSVLENSY 252


>ref|XP_002301184.1| predicted protein [Populus trichocarpa] gi|222842910|gb|EEE80457.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  315 bits (808), Expect = 9e-84
 Identities = 151/217 (69%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
 Frame = -2

Query: 984 KYVSNRWSSSIPGVGVPCVEK-LISNDKERIFSIRDLHQSAQI-RGFLGCGDGEEGSVLS 811
           K+   R  SS+ G+  P + +   +N K+   +  +L+ +  I RGFLGCGDGEEGSVLS
Sbjct: 31  KFDQTRCLSSLAGILNPSISRGTYNNRKDFDLASGNLYNNTTIKRGFLGCGDGEEGSVLS 90

Query: 810 KTYEEKRVMGYTPEQLFAVVAAVDMYEDFLPWCQRSKIVRHNPDGSFDAELEIGFKFLVE 631
           K YEE+RV+GY+PEQLF VVAAVD+Y  F+PWCQRS+I++  PDGSFDAELEIGFKFLVE
Sbjct: 91  KVYEERRVLGYSPEQLFDVVAAVDLYHGFVPWCQRSEILKQYPDGSFDAELEIGFKFLVE 150

Query: 630 SYMSHVEMTKPKYIKTTASESNLFDHLINVWEFSPGPIPGTCGLYFMVDFKFQSPLYRQV 451
           SY+SHVE+ +PK++KTT+SESNLFDHLIN+WEF+PGP+PG+C LYF+VDFKFQSPLYRQV
Sbjct: 151 SYVSHVELNRPKFLKTTSSESNLFDHLINIWEFNPGPVPGSCELYFLVDFKFQSPLYRQV 210

Query: 450 ASMFFKEVVSRLVGSFSDRCRLIYGPGVQVLENSYGQ 340
           ASMFFKEVVSRLVGSF +RCRLIYGPGV VLE SYG+
Sbjct: 211 ASMFFKEVVSRLVGSFDERCRLIYGPGVSVLEKSYGE 247


>ref|XP_003569927.1| PREDICTED: coenzyme Q-binding protein COQ10 homolog A,
           mitochondrial-like [Brachypodium distachyon]
          Length = 248

 Score =  312 bits (799), Expect = 1e-82
 Identities = 148/177 (83%), Positives = 162/177 (91%)
 Frame = -2

Query: 864 QIRGFLGCGDGEEGSVLSKTYEEKRVMGYTPEQLFAVVAAVDMYEDFLPWCQRSKIVRHN 685
           Q R FLGCGDGEEGSVLSK YEE+RVMGY+PEQ++AVVAAVD+YEDF+PWCQRS++VR  
Sbjct: 72  QTRCFLGCGDGEEGSVLSKVYEERRVMGYSPEQMYAVVAAVDLYEDFVPWCQRSRVVRRY 131

Query: 684 PDGSFDAELEIGFKFLVESYMSHVEMTKPKYIKTTASESNLFDHLINVWEFSPGPIPGTC 505
            +GSFDAELEIGFKFLVESY+SHVEM KPKYIKTTAS+S LFDHLINVWEF PGPIPGTC
Sbjct: 132 DNGSFDAELEIGFKFLVESYVSHVEMEKPKYIKTTASQSGLFDHLINVWEFKPGPIPGTC 191

Query: 504 GLYFMVDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRCRLIYGPGVQVLENSYGQDR 334
            LYF+VDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRC  IYGP V VLEN++GQ R
Sbjct: 192 DLYFLVDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRCFRIYGPAVPVLENTHGQGR 248


>gb|EAY75988.1| hypothetical protein OsI_03911 [Oryza sativa Indica Group]
          Length = 257

 Score =  311 bits (798), Expect = 1e-82
 Identities = 146/177 (82%), Positives = 161/177 (90%)
 Frame = -2

Query: 864 QIRGFLGCGDGEEGSVLSKTYEEKRVMGYTPEQLFAVVAAVDMYEDFLPWCQRSKIVRHN 685
           Q R FLGCGDG+EGSVLSK YEE+RVMGY+PEQ+FAVVAAVD+YEDF+PWCQRS+I+R +
Sbjct: 81  QTRSFLGCGDGDEGSVLSKVYEERRVMGYSPEQMFAVVAAVDLYEDFVPWCQRSRIIRRH 140

Query: 684 PDGSFDAELEIGFKFLVESYMSHVEMTKPKYIKTTASESNLFDHLINVWEFSPGPIPGTC 505
            +GSFDAELEIGFKFLVESY+SHVEM KPKYIKTTASES LFDHLINVWEF PGP+PGTC
Sbjct: 141 ENGSFDAELEIGFKFLVESYVSHVEMEKPKYIKTTASESGLFDHLINVWEFKPGPVPGTC 200

Query: 504 GLYFMVDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRCRLIYGPGVQVLENSYGQDR 334
            LYF+VDFKFQSPLYRQVASMFFKEVVSRLV S SDRC  IYGP + VLEN+YGQ R
Sbjct: 201 DLYFLVDFKFQSPLYRQVASMFFKEVVSRLVSSLSDRCYRIYGPPIPVLENTYGQGR 257


>ref|NP_001044391.1| Os01g0772400 [Oryza sativa Japonica Group]
           gi|56785219|dbj|BAD82071.1| aromatic-rich family
           protein-like [Oryza sativa Japonica Group]
           gi|113533922|dbj|BAF06305.1| Os01g0772400 [Oryza sativa
           Japonica Group]
          Length = 257

 Score =  311 bits (798), Expect = 1e-82
 Identities = 146/177 (82%), Positives = 161/177 (90%)
 Frame = -2

Query: 864 QIRGFLGCGDGEEGSVLSKTYEEKRVMGYTPEQLFAVVAAVDMYEDFLPWCQRSKIVRHN 685
           Q R FLGCGDG+EGSVLSK YEE+RVMGY+PEQ+FAVVAAVD+YEDF+PWCQRS+I+R +
Sbjct: 81  QTRSFLGCGDGDEGSVLSKVYEERRVMGYSPEQMFAVVAAVDLYEDFVPWCQRSRIIRRH 140

Query: 684 PDGSFDAELEIGFKFLVESYMSHVEMTKPKYIKTTASESNLFDHLINVWEFSPGPIPGTC 505
            +GSFDAELEIGFKFLVESY+SHVEM KPKYIKTTASES LFDHLINVWEF PGP+PGTC
Sbjct: 141 ENGSFDAELEIGFKFLVESYVSHVEMEKPKYIKTTASESGLFDHLINVWEFKPGPVPGTC 200

Query: 504 GLYFMVDFKFQSPLYRQVASMFFKEVVSRLVGSFSDRCRLIYGPGVQVLENSYGQDR 334
            LYF+VDFKFQSPLYRQVASMFFKEVVSRLV S SDRC  IYGP + VLEN+YGQ R
Sbjct: 201 DLYFLVDFKFQSPLYRQVASMFFKEVVSRLVSSLSDRCYRIYGPPIPVLENTYGQGR 257


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