BLASTX nr result

ID: Coptis25_contig00033333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033333
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]   114   1e-23
ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798...   102   2e-20
emb|CBI28534.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago ...    95   5e-18
ref|XP_003520016.1| PREDICTED: uncharacterized protein LOC100779...    94   1e-17

>emb|CAN59925.1| hypothetical protein VITISV_043883 [Vitis vinifera]
          Length = 119

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
 Frame = -2

Query: 337 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 167
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 166 PKRDHQNSRPKDGDLEFGFKQRIPMEKPIGHGEIRE--PRPVYNGEHKGDTRFAE 8
             + +   RPK+ DLEFGF +  P  KP G+G  +    RP  NGE + + +  E
Sbjct: 61  NPKQNSAFRPKEPDLEFGFDKGRPTAKPAGNGGPKHNGHRPFENGEIRAENKPTE 115


>ref|XP_003517713.1| PREDICTED: uncharacterized protein LOC100798784 [Glycine max]
          Length = 149

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/119 (47%), Positives = 74/119 (62%), Gaps = 13/119 (10%)
 Frame = -2

Query: 325 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHS------K 167
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR  HS      K
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGGHSHNQKHVK 80

Query: 166 PKR------DHQNSRPKDGDLEFGFKQRIPMEKPIGHGEIREPRPVYNGEHKGDTRFAE 8
           P++      +H N RPK+ D+EFGF +RI   KP GHG  R  +P+    H GD +  E
Sbjct: 81  PQKKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNGHGAGRGIKPL---PHHGDVKTFE 136


>emb|CBI28534.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
 Frame = -2

Query: 337 MSLP---PPVIYPNTVTTQPSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARRLSHSK 167
           MSLP   PPVIYPNTVT QP SHS GSFG VFI+L VI+V+SA AC LG+LC RR  H  
Sbjct: 1   MSLPQQQPPVIYPNTVTRQPPSHSNGSFGTVFIVLGVIVVISAIACVLGRLCNRRRHHHP 60

Query: 166 PKRDHQNSRPKDGDLEFGFKQRIP 95
             + +   RPK+ DLEF   Q  P
Sbjct: 61  NPKQNSAFRPKEPDLEFVIFQNYP 84


>ref|XP_003613224.1| hypothetical protein MTR_5g034200 [Medicago truncatula]
           gi|355514559|gb|AES96182.1| hypothetical protein
           MTR_5g034200 [Medicago truncatula]
           gi|388520363|gb|AFK48243.1| unknown [Medicago
           truncatula]
          Length = 168

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/133 (43%), Positives = 76/133 (57%), Gaps = 35/133 (26%)
 Frame = -2

Query: 325 PPVIYPNTVTTQ-----PSSHSK-GSFGPVFIILAVIIVLSAFACCLGQLCARR---LSH 173
           P  +YP TVT Q     P  HS  GSFG VF++LA+IIV+SA ACCLG+ C+RR    SH
Sbjct: 16  PVQVYPTTVTYQYAPPEPDHHSSNGSFGSVFVVLAIIIVISAVACCLGRFCSRRGNGKSH 75

Query: 172 S-KP-----KRDHQNSRPKDGDLEFGFKQRIPMEKPI--------------------GHG 71
           S KP     +++HQ+SRPK+ D+EFGF ++I   KP+                    GHG
Sbjct: 76  SQKPVKHQKQQNHQHSRPKEVDIEFGFDKKIAASKPMNNGHGGFPKNNGHGGFSKNNGHG 135

Query: 70  EIREPRPVYNGEH 32
            +R  +PV  G H
Sbjct: 136 GVRVQKPVAQGHH 148


>ref|XP_003520016.1| PREDICTED: uncharacterized protein LOC100779866 [Glycine max]
          Length = 151

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 13/119 (10%)
 Frame = -2

Query: 325 PPVIYPNTVTTQ-PSSHSKGSFGPVFIILAVIIVLSAFACCLGQLCARR-------LSHS 170
           P  +YP +VT + P  HS GSFG VF++LA+IIV+SA ACCLG+LC RR         H 
Sbjct: 21  PVQVYPTSVTYESPPHHSNGSFGSVFVVLAIIIVISAVACCLGRLCNRRGHSHGHNQKHV 80

Query: 169 KPKR-----DHQNSRPKDGDLEFGFKQRIPMEKPIGHGEIREPRPVYNGEHKGDTRFAE 8
           KP++     +H N RPK+ D+EFGF +RI   KP G G     R +    H GD R  E
Sbjct: 81  KPQKQQQQQNHHNFRPKEVDIEFGFDKRIAASKPNGAG-AGAGRGIKPLPHHGDMRTFE 138


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