BLASTX nr result

ID: Coptis25_contig00033331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033331
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycin...   244   1e-62
gb|ACU23165.1| unknown [Glycine max]                                  243   4e-62
gb|AAS19480.1| MYB6 [Tradescantia fluminensis]                        243   5e-62
gb|AAN28270.1| myb-like transcription factor 1 [Gossypium hirsutum]   242   9e-62
gb|AAA33067.1| MYB1 [Gossypium hirsutum] gi|23476277|gb|AAN28269...   241   1e-61

>ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycine max]
           gi|255642080|gb|ACU21306.1| unknown [Glycine max]
          Length = 303

 Score =  244 bits (624), Expect = 1e-62
 Identities = 137/281 (48%), Positives = 164/281 (58%), Gaps = 37/281 (13%)
 Frame = +1

Query: 130 MGRSPSSFDHKPHLNKGAWTEEEDQILINYIKVHGEGSWRQLPKAAGLLRCGKSCRLRWT 309
           MGRSP     K H NKGAWT+EED+ LINYIK+HGEG WR LPKAAGLLRCGKSCRLRW 
Sbjct: 1   MGRSPCC--EKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWI 58

Query: 310 NYLRPDLRRGNFTEEEDEIIVKLHSLHGNKWSLIAERLPGRTDNEIKNYWNTHIRRKLLS 489
           NYLRPDL+RGNFTEEEDE+I+ LHSL GNKWSLIA RLPGRTDNEIKNYWNTHI+RKL S
Sbjct: 59  NYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYS 118

Query: 490 QGIDPKTHRRINA----------------------------IASDNGGGNNSISCIPTVD 585
           +GIDP+THR +NA                            I +D    NN    +    
Sbjct: 119 RGIDPRTHRPLNASATPATTATATAVPSANSSKKINNNNNNIDNDINNNNNGFQLVSN-S 177

Query: 586 SFQMAKVGKSRDDSAHNASGNRGIGEEEQ--QHQXXXXXXXXXXXVQSPTSTNSEEFKQK 759
           ++  AK+G +   +A +++ + G+  EE    HQ               +S N E+ K +
Sbjct: 178 AYANAKIGTNL-VAAEDSNSSSGVTTEESVPHHQLNLDLSIGLPSQPQGSSLNPEKLKPE 236

Query: 760 -----DSSFQTLVK--PQPVLSHNICLCCNLGLYGKEGCKC 861
                D   Q L K          +CLC NLGL   + C C
Sbjct: 237 PQEHDDQKPQVLYKWYGNITSQQGVCLCYNLGLQSNQTCYC 277


>gb|ACU23165.1| unknown [Glycine max]
          Length = 302

 Score =  243 bits (620), Expect = 4e-62
 Identities = 134/277 (48%), Positives = 159/277 (57%), Gaps = 33/277 (11%)
 Frame = +1

Query: 130 MGRSPSSFDHKPHLNKGAWTEEEDQILINYIKVHGEGSWRQLPKAAGLLRCGKSCRLRWT 309
           MGRSP     K H NKGAWT+EED+ LINYIK+HGEG WR LPKAAGLLRCGKSCRLRW 
Sbjct: 1   MGRSPCC--EKEHANKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWI 58

Query: 310 NYLRPDLRRGNFTEEEDEIIVKLHSLHGNKWSLIAERLPGRTDNEIKNYWNTHIRRKLLS 489
           NYLRPDL+RGNFTEEEDE+I+ LHSL GNKWSLIA RLPGRTDNEIKNYWNTHI+RKL S
Sbjct: 59  NYLRPDLKRGNFTEEEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYS 118

Query: 490 QGIDPKTHRRINA----------------------IASDNGGGNNSISCIPTVDSFQMAK 603
           +GIDP+THR +NA                      I ++N   NN    +    ++   K
Sbjct: 119 RGIDPQTHRPLNAASATPATTVTATAVPSSNSKKKIKNNNNNNNNGFQLVNN-SAYANTK 177

Query: 604 VGKSRDDSAHNASGNRGIGEEEQQHQXXXXXXXXXXXVQSPT---STNSEEFK------- 753
           +G     +A +++ + G+  EE                  P    S N E+ K       
Sbjct: 178 IGTDM-IAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPSQPQVFFSLNPEKLKPEPQEHD 236

Query: 754 -QKDSSFQTLVKPQPVLSHNICLCCNLGLYGKEGCKC 861
            QK      L          +CLC NLGL   + C C
Sbjct: 237 DQKPQVLYQLYGKNITGQQGVCLCYNLGLQSNQACYC 273


>gb|AAS19480.1| MYB6 [Tradescantia fluminensis]
          Length = 268

 Score =  243 bits (619), Expect = 5e-62
 Identities = 135/249 (54%), Positives = 158/249 (63%), Gaps = 5/249 (2%)
 Frame = +1

Query: 130 MGRSPSSFDHKPHLNKGAWTEEEDQILINYIKVHGEGSWRQLPKAAGLLRCGKSCRLRWT 309
           MGRSP     K H NKGAWT+EEDQ LI YIKVHGEG WR LPKAAGLLRCGKSCRLRW 
Sbjct: 1   MGRSPCC--EKAHTNKGAWTKEEDQRLIAYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWI 58

Query: 310 NYLRPDLRRGNFTEEEDEIIVKLHSLHGNKWSLIAERLPGRTDNEIKNYWNTHIRRKLLS 489
           NYLRPDL+RGNFTEEEDE+I+KLH+L GNKWSLIA RLPGRTDNEIKNYWNTHI+RKL+S
Sbjct: 59  NYLRPDLKRGNFTEEEDELIIKLHALLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLIS 118

Query: 490 QGIDPKTHRRINA-----IASDNGGGNNSISCIPTVDSFQMAKVGKSRDDSAHNASGNRG 654
           +GIDP+THR INA     I+S N  G  S+  I   ++ + +    S+D  ++  S    
Sbjct: 119 RGIDPQTHRPINAGSQFTISSANHQG--SLKNIRDNEALKQSPNSSSQDMQSN--SSVID 174

Query: 655 IGEEEQQHQXXXXXXXXXXXVQSPTSTNSEEFKQKDSSFQTLVKPQPVLSHNICLCCNLG 834
           + E                  Q P S+++E  K    +  T           ICLC NLG
Sbjct: 175 VVERCPDLNLDIAINIAYSTDQKPFSSSTEVQKAPAVTQATTPTSVSPYFQPICLCYNLG 234

Query: 835 LYGKEGCKC 861
               E C C
Sbjct: 235 FSKSEACSC 243


>gb|AAN28270.1| myb-like transcription factor 1 [Gossypium hirsutum]
          Length = 294

 Score =  242 bits (617), Expect = 9e-62
 Identities = 141/279 (50%), Positives = 166/279 (59%), Gaps = 36/279 (12%)
 Frame = +1

Query: 130 MGRSPSSFDHKPHLNKGAWTEEEDQILINYIKVHGEGSWRQLPKAAGLLRCGKSCRLRWT 309
           MGRSP     K H NKGAWT+EEDQ LINYI+VHGEG WR LPKAAGLLRCGKSCRLRW 
Sbjct: 1   MGRSPCC--EKAHTNKGAWTKEEDQRLINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWI 58

Query: 310 NYLRPDLRRGNFTEEEDEIIVKLHSLHGNKWSLIAERLPGRTDNEIKNYWNTHIRRKLLS 489
           NYLRPDL+RGNFTEEEDE+I+KLHSL GNKWSLIA RLPGRTDNEIKNYWNTHI+RKL+S
Sbjct: 59  NYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLIS 118

Query: 490 QGIDPKTHRRINAIASDN---------------GGGNNSISCIPTVDSFQMAKVGKSRDD 624
           +GIDP+THR +N  A+ N                   +S    P++D        KS  D
Sbjct: 119 RGIDPQTHRPLNQTANTNTVTAPTELDFRNTPTSVSKSSSIKNPSLDFNYNEFQFKSNTD 178

Query: 625 SAHNASGNRGIG---EEEQQHQXXXXXXXXXXXVQS----------------PTSTNSEE 747
           S    +     G   +EEQQ Q            Q                  +S NS E
Sbjct: 179 SLEEPNCTTSSGMTTDEEQQEQLHKQQQYDPSNGQDLNLELSIGIVSADSSRVSSANSAE 238

Query: 748 FKQK--DSSFQTLVKPQPVLSHNICLCCNLGLYGKEGCK 858
            K K  +++FQ L   Q +++  +CLC  LG    E C+
Sbjct: 239 SKPKVDNNNFQFL--EQAMVAKAVCLCWQLGFGTSEICR 275


>gb|AAA33067.1| MYB1 [Gossypium hirsutum] gi|23476277|gb|AAN28269.1| myb-like
           transcription factor 1 [Gossypium hirsutum]
          Length = 294

 Score =  241 bits (616), Expect = 1e-61
 Identities = 142/279 (50%), Positives = 171/279 (61%), Gaps = 36/279 (12%)
 Frame = +1

Query: 130 MGRSPSSFDHKPHLNKGAWTEEEDQILINYIKVHGEGSWRQLPKAAGLLRCGKSCRLRWT 309
           MGRSP     K H NKGAWT+EEDQ LINYI+VHGEG WR LPKAAGLLRCGKSCRLRW 
Sbjct: 1   MGRSPCC--EKAHTNKGAWTKEEDQRLINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWI 58

Query: 310 NYLRPDLRRGNFTEEEDEIIVKLHSLHGNKWSLIAERLPGRTDNEIKNYWNTHIRRKLLS 489
           NYLRPDL+RGNFTEEEDE+I+KLHSL GNKWSLIA RLPGRTDNEIKNYWNTHI+RKL+S
Sbjct: 59  NYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLIS 118

Query: 490 QGIDPKTHRRINAIASDNG-------GGNNSISCI--------PTVDSFQMAKVGKSRDD 624
           +GIDP+THR +N  A+ N           NS + +        P++D        KS  D
Sbjct: 119 RGIDPQTHRPLNQTANTNTVTAPTELDFRNSPTSVSKSSSIKNPSLDFNYNEFQFKSNTD 178

Query: 625 SAH--NASGNRGI-GEEEQQHQXXXXXXXXXXXVQS----------------PTSTNSEE 747
           S    N + + G+  +EEQQ Q            Q                  ++ NS E
Sbjct: 179 SLEEPNCTASSGMTTDEEQQEQLHKKQQYGPSNGQDINLELSIGIVSADSSRVSNANSAE 238

Query: 748 FKQK--DSSFQTLVKPQPVLSHNICLCCNLGLYGKEGCK 858
            K K  +++FQ L   Q +++  +CLC  LG    E C+
Sbjct: 239 SKPKVDNNNFQFL--EQAMVAKAVCLCWQLGFGTSEICR 275


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