BLASTX nr result

ID: Coptis25_contig00033319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033319
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632149.1| PREDICTED: U-box domain-containing protein 3...   182   2e-44
emb|CBI16147.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_003539086.1| PREDICTED: U-box domain-containing protein 3...   179   2e-43
ref|XP_003547023.1| PREDICTED: U-box domain-containing protein 3...   177   6e-43
ref|XP_002299877.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43

>ref|XP_003632149.1| PREDICTED: U-box domain-containing protein 33-like [Vitis vinifera]
          Length = 836

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/143 (64%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
 Frame = -3

Query: 427 VHVAVGKSIEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGY 248
           VHVAVGKS+EK+  LL WTFR F + +I LVHVHQPS  IPTLLGKLPA+QAN E+V  +
Sbjct: 52  VHVAVGKSVEKAESLLHWTFRRFGSCEICLVHVHQPSPLIPTLLGKLPASQANGEVVSAH 111

Query: 247 RREEEEQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVI-GAASD 71
           RREE++Q  KLLLNY NICS+ KVK +I T E++ V KGIV+LV +H IRKLV+ G   +
Sbjct: 112 RREEKKQTNKLLLNYSNICSRMKVKPSIITIEADHVQKGIVDLVNRHGIRKLVMGGTVPE 171

Query: 70  NCLKVKKGISKANYASKYAPPFC 2
           NC+KVK   SKANYA+K AP FC
Sbjct: 172 NCMKVKMSSSKANYAAKKAPEFC 194


>emb|CBI16147.3| unnamed protein product [Vitis vinifera]
          Length = 820

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/143 (64%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
 Frame = -3

Query: 427 VHVAVGKSIEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGY 248
           VHVAVGKS+EK+  LL WTFR F + +I LVHVHQPS  IPTLLGKLPA+QAN E+V  +
Sbjct: 52  VHVAVGKSVEKAESLLHWTFRRFGSCEICLVHVHQPSPLIPTLLGKLPASQANGEVVSAH 111

Query: 247 RREEEEQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVI-GAASD 71
           RREE++Q  KLLLNY NICS+ KVK +I T E++ V KGIV+LV +H IRKLV+ G   +
Sbjct: 112 RREEKKQTNKLLLNYSNICSRMKVKPSIITIEADHVQKGIVDLVNRHGIRKLVMGGTVPE 171

Query: 70  NCLKVKKGISKANYASKYAPPFC 2
           NC+KVK   SKANYA+K AP FC
Sbjct: 172 NCMKVKMSSSKANYAAKKAPEFC 194


>ref|XP_003539086.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 776

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/143 (60%), Positives = 110/143 (76%)
 Frame = -3

Query: 430 IVHVAVGKSIEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKG 251
           +VHVAVGKS++K+  LL+W F HF    I L+HVHQPST IPTLLGKLPA+QA+ E+V  
Sbjct: 11  MVHVAVGKSLKKAATLLQWCFTHFSKPQIFLLHVHQPSTMIPTLLGKLPASQASPEVVSA 70

Query: 250 YRREEEEQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASD 71
           YR EE+E  ++LL  YL++C  AKVKA+    E++QV KGIV+LV  H +RKLVIGA  +
Sbjct: 71  YRIEEKEDTKRLLEKYLSLCRAAKVKASSVIGEADQVQKGIVDLVTVHNVRKLVIGAIPE 130

Query: 70  NCLKVKKGISKANYASKYAPPFC 2
           NC+K+K+  SKANYA+K APPFC
Sbjct: 131 NCMKIKRNSSKANYAAKNAPPFC 153


>ref|XP_003547023.1| PREDICTED: U-box domain-containing protein 33-like [Glycine max]
          Length = 780

 Score =  177 bits (450), Expect = 6e-43
 Identities = 84/142 (59%), Positives = 108/142 (76%)
 Frame = -3

Query: 427 VHVAVGKSIEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGY 248
           VHVAVGKS++K+V LL+WT  HF N +I +VH +QPS TIPTLLGKLPA+QA+  +V  +
Sbjct: 5   VHVAVGKSLDKAVPLLRWTLNHFRNAEIVIVHAYQPSLTIPTLLGKLPASQASPAVVSAF 64

Query: 247 RREEEEQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASDN 68
           R+ E EQ  KLL  YL+IC  A+V+A++   E++QV KGIV+LV KH I KLVIGA  +N
Sbjct: 65  RKAEREQTVKLLDKYLSICRAARVRASVIVTEADQVQKGIVDLVIKHNIEKLVIGAIPEN 124

Query: 67  CLKVKKGISKANYASKYAPPFC 2
           C+KVK+   KANY +K APPFC
Sbjct: 125 CMKVKRNSGKANYTAKNAPPFC 146


>ref|XP_002299877.1| predicted protein [Populus trichocarpa] gi|222847135|gb|EEE84682.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/142 (61%), Positives = 107/142 (75%)
 Frame = -3

Query: 427 VHVAVGKSIEKSVDLLKWTFRHFENRDIGLVHVHQPSTTIPTLLGKLPATQANEEMVKGY 248
           V+VA+G SIEK+V LL W F     R I L+HVH+PS  IPTLLGKLPA+QAN E+V  +
Sbjct: 18  VYVALGNSIEKAVSLLNWVFESLGTRQICLLHVHRPSPLIPTLLGKLPASQANAEVVSAF 77

Query: 247 RREEEEQCQKLLLNYLNICSKAKVKATIFTAESEQVHKGIVELVRKHRIRKLVIGAASDN 68
           RREE E+ +KL   YL IC +AKV+ATI T ES+QVHKGIVELV +H +RKLV+G   +N
Sbjct: 78  RREENERAKKLFDYYLIICRRAKVEATIVTIESDQVHKGIVELVNRHGVRKLVMGTVKEN 137

Query: 67  CLKVKKGISKANYASKYAPPFC 2
           C+KVKK   K NYA+K+AP FC
Sbjct: 138 CMKVKKSSCKENYAAKHAPLFC 159


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