BLASTX nr result

ID: Coptis25_contig00033308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033308
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72466.1| putative protein [Arabidopsis thaliana]                71   8e-11
ref|XP_003523531.1| PREDICTED: uncharacterized protein LOC100813...    70   2e-10
ref|XP_003576917.1| PREDICTED: uncharacterized protein LOC100839...    69   3e-10
ref|XP_003573184.1| PREDICTED: uncharacterized protein LOC100826...    69   4e-10
ref|XP_003547385.1| PREDICTED: uncharacterized protein LOC100786...    68   7e-10

>emb|CAB72466.1| putative protein [Arabidopsis thaliana]
          Length = 377

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
 Frame = -1

Query: 414 LRHSSLRNIVECIIGILKKQFAILALPPPYPFETQVKIVIIACCILHNHIRREKLNDEFF 235
           LRH+SLRN++E I GI K +F I    PPYPF+TQ ++V +AC  LHN + +E  +DEF 
Sbjct: 266 LRHASLRNVIERIFGIFKSRFLIFKSAPPYPFKTQTELV-LACAGLHNFLHQECRSDEFP 324

Query: 234 DKDRKEQEELEGDSGMRRQDLGNLS--RNRIREIASDYRKSIA 112
            +    +E  + +     ++ G++    ++ RE A+++R +I+
Sbjct: 325 PETSINEENSDDNEENNYEENGDVGILESQQREYANNWRDTIS 367


>ref|XP_003523531.1| PREDICTED: uncharacterized protein LOC100813800 [Glycine max]
          Length = 215

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
 Frame = -1

Query: 414 LRHSSLRNIVECIIGILKKQFAILALPPPYPFETQVKIVIIACCILHNHIRREKLNDEFF 235
           LRH+SLRN++E I GI K +F I    PP+ F+TQ ++V +AC  LHN +R+E L   + 
Sbjct: 122 LRHASLRNVIERIFGIFKSRFTIFKSAPPFLFKTQAELV-LACAALHNFLRKECLLPNYE 180

Query: 234 DKDR----KEQEELEGDSGMRRQDLGN 166
           D D     + QE+  GD+ + R ++G+
Sbjct: 181 DNDHEPIVQTQEQERGDANIWRTNIGS 207


>ref|XP_003576917.1| PREDICTED: uncharacterized protein LOC100839635 [Brachypodium
           distachyon]
          Length = 321

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
 Frame = -1

Query: 414 LRHSSLRNIVECIIGILKKQFAILALPPPYPFETQVKIVIIACCILHNHIRREKLNDEFF 235
           LRH+ LRN VE IIG++KK+F IL     YP ++Q  I  IACC+LHN IR+ +  +++ 
Sbjct: 199 LRHAQLRNHVERIIGVVKKRFPILKCASHYPIDSQASIA-IACCVLHNFIRKHEGGEKWL 257

Query: 234 DK-----DRKEQEELEGDSGMRRQDLGNLSRNRIREIASDYRKSIAE 109
           DK     D K   ++       R D+ +L  N+ R + +  R  IAE
Sbjct: 258 DKVASNIDPKHIVDIPSGDRQYRSDVQSL--NQRRALGNTKRDQIAE 302


>ref|XP_003573184.1| PREDICTED: uncharacterized protein LOC100826880 [Brachypodium
           distachyon]
          Length = 285

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
 Frame = -1

Query: 408 HSSLRNIVECIIGILKKQFAILALPPPYPFETQVKIVIIACCILHNHIRREKLNDEFFDK 229
           HSSLRN++E   G+LK+++ IL   P YP + Q KI IIAC  LHN IR   L DE FDK
Sbjct: 182 HSSLRNVIERSFGVLKQKWRILGDVPSYPVKKQTKI-IIACMALHNFIRESHLFDEDFDK 240

Query: 228 -DRKEQEELEG----DSGMRRQDLGNLSRNRIRE 142
            DR E     G     +G   +  GN++ N  RE
Sbjct: 241 CDRDEDYMPPGHVVVTNGWNHEGQGNVNMNATRE 274


>ref|XP_003547385.1| PREDICTED: uncharacterized protein LOC100786058 [Glycine max]
          Length = 475

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = -1

Query: 414 LRHSSLRNIVECIIGILKKQFAILALPPPYPFETQVKIVIIACCILHNHIRREKLNDEF 238
           LRH+SLRN++E I GI K +F I    PP+PF+TQ ++V +AC  LHN +R+E  +DEF
Sbjct: 364 LRHASLRNVIERIFGIFKSRFTIFKSAPPFPFKTQAELV-LACATLHNFLRKECRSDEF 421


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