BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033291
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   195   8e-48
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              194   1e-47
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   194   2e-47
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   189   5e-46
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth...   187   2e-45

>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  195 bits (495), Expect = 8e-48
 Identities = 93/143 (65%), Positives = 121/143 (84%)
 Frame = -2

Query: 674 VLYQIRKMVGTAVAVKRKLLPQDLIEMSLTKFSRIVLPLAPSEVLILRSNQFSLRNHPGN 495
           +L+QIRKMVGTA+AVKR+LLP+D++ +SLTKFSRIVLPLAPSEVLILR N FS+R  PGN
Sbjct: 375 MLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGN 434

Query: 494 VTRPELVTLVESDKVLKAVNEFYESFMLPQVSKFLDPSNPPWKQWVETLDGNTSIPDEEL 315
           V RPE++TL+ES+++LK+V+EFY S +LPQVSKFLDPS  PW  W+E L   +SIP+ EL
Sbjct: 435 VKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLT-LSSIPEAEL 493

Query: 314 EEVRTAWKTWKNNYQARHTEVSV 246
           ++VRTAWK WK N+++R   +S+
Sbjct: 494 DDVRTAWKLWKENFRSRTKVMSI 516


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  194 bits (493), Expect = 1e-47
 Identities = 93/143 (65%), Positives = 121/143 (84%)
 Frame = -2

Query: 674 VLYQIRKMVGTAVAVKRKLLPQDLIEMSLTKFSRIVLPLAPSEVLILRSNQFSLRNHPGN 495
           +L+QIRKMVGTA+AVKR+LLP+D++ +SLTKFSRIVLPLAPSEVLILR N FS+R  PGN
Sbjct: 354 MLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGN 413

Query: 494 VTRPELVTLVESDKVLKAVNEFYESFMLPQVSKFLDPSNPPWKQWVETLDGNTSIPDEEL 315
           V RPE++TL+ES+++LK+V+EFY S +LPQVSKFLDPS  PW  W+E L   +SIP+ EL
Sbjct: 414 VKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLT-LSSIPEAEL 472

Query: 314 EEVRTAWKTWKNNYQARHTEVSV 246
           ++VRTAWK WK N+++R   +S+
Sbjct: 473 DDVRTAWKLWKENFRSRTKVMSM 495


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  194 bits (492), Expect = 2e-47
 Identities = 92/137 (67%), Positives = 118/137 (86%)
 Frame = -2

Query: 674 VLYQIRKMVGTAVAVKRKLLPQDLIEMSLTKFSRIVLPLAPSEVLILRSNQFSLRNHPGN 495
           +L+QIRKMVGTA+AVKR+LLP+D++ +SLTKFSRIVLPLAPSEVLILR N FS+R  PGN
Sbjct: 375 MLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGN 434

Query: 494 VTRPELVTLVESDKVLKAVNEFYESFMLPQVSKFLDPSNPPWKQWVETLDGNTSIPDEEL 315
           V RPE++TL+ES+++LK+V+EFY S +LPQVSKFLDPS  PW  W+E L   +SIP+ EL
Sbjct: 435 VKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLT-LSSIPEAEL 493

Query: 314 EEVRTAWKTWKNNYQAR 264
           ++VRTAWK WK N+++R
Sbjct: 494 DDVRTAWKLWKENFRSR 510


>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517306|gb|AES98929.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 501

 Score =  189 bits (480), Expect = 5e-46
 Identities = 88/136 (64%), Positives = 113/136 (83%)
 Frame = -2

Query: 674 VLYQIRKMVGTAVAVKRKLLPQDLIEMSLTKFSRIVLPLAPSEVLILRSNQFSLRNHPGN 495
           +L+QIRKMV TAVAVKRKLLP+D+I +SL+KFSRI+LPLAPSEVL+LR N FS+R  PGN
Sbjct: 360 MLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRTKPGN 419

Query: 494 VTRPELVTLVESDKVLKAVNEFYESFMLPQVSKFLDPSNPPWKQWVETLDGNTSIPDEEL 315
           VTRPE+ T+VES+++ K V++FY S MLPQVSKFLDPS  PW +W+E  D +TSIP+++L
Sbjct: 420 VTRPEMQTIVESEEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQL 479

Query: 314 EEVRTAWKTWKNNYQA 267
           +EVR A   WK N+ +
Sbjct: 480 DEVRKARNLWKENFDS 495


>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 516

 Score =  187 bits (475), Expect = 2e-45
 Identities = 90/137 (65%), Positives = 113/137 (82%)
 Frame = -2

Query: 674 VLYQIRKMVGTAVAVKRKLLPQDLIEMSLTKFSRIVLPLAPSEVLILRSNQFSLRNHPGN 495
           +L+QIRKMVGTAVAVKR L+P+D I +SL+KFSRIVLPLAP EVLILR N F +R   GN
Sbjct: 375 MLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVLPLAPPEVLILRGNAFKMRASAGN 434

Query: 494 VTRPELVTLVESDKVLKAVNEFYESFMLPQVSKFLDPSNPPWKQWVETLDGNTSIPDEEL 315
            TR E+V++VES+++L+AV+EFY S +LP+VSKFLD SN PW +WVE LD  +SIPD EL
Sbjct: 435 FTRQEMVSMVESEQILEAVDEFYTSVVLPEVSKFLDSSNSPWAKWVENLDKYSSIPDAEL 494

Query: 314 EEVRTAWKTWKNNYQAR 264
           +EVR AWKTWK N++ +
Sbjct: 495 DEVRKAWKTWKENFRLK 511