BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033290
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth...    58   7e-07
ref|XP_004171695.1| PREDICTED: putative tRNA pseudouridine synth...    56   3e-06
ref|XP_004153611.1| PREDICTED: putative tRNA pseudouridine synth...    56   3e-06
ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synth...    56   3e-06
ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synth...    55   5e-06

>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 516

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/47 (55%), Positives = 30/47 (63%)
 Frame = -2

Query: 156 FLDPLNPLWKQWAETLDGKTSILDEELEEVRTAWKTWKNNHRITEVS 16
           FLD  N  W +W E LD  +SI D EL+EVR AWKTWK N R+   S
Sbjct: 468 FLDSSNSPWAKWVENLDKYSSIPDAELDEVRKAWKTWKENFRLKSAS 514


>ref|XP_004171695.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
           sativus]
          Length = 421

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 156 FLDPLNPLWKQWAETLDGKTSILDEELEEVRTAWKTWK 43
           FLD  +P WK+W E LD  TSI +EEL+EVR+AWK WK
Sbjct: 380 FLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWK 417


>ref|XP_004153611.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
           sativus]
          Length = 464

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 156 FLDPLNPLWKQWAETLDGKTSILDEELEEVRTAWKTWK 43
           FLD  +P WK+W E LD  TSI +EEL+EVR+AWK WK
Sbjct: 423 FLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWK 460


>ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
           sativus]
          Length = 507

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 156 FLDPLNPLWKQWAETLDGKTSILDEELEEVRTAWKTWK 43
           FLD  +P WK+W E LD  TSI +EEL+EVR+AWK WK
Sbjct: 466 FLDTESPPWKEWVEKLDKYTSIPNEELDEVRSAWKAWK 503


>ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 518

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 30/47 (63%)
 Frame = -2

Query: 156 FLDPLNPLWKQWAETLDGKTSILDEELEEVRTAWKTWKNNHRITEVS 16
           FLD  +  W +W E LD  +SI D EL+EVR AWKTWK N R+   S
Sbjct: 470 FLDSSSSPWAKWVENLDKYSSIPDVELDEVRKAWKTWKENFRVKSES 516