BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033282
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535452.1| conserved hypothetical protein [Ricinus comm...    82   2e-13
ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medica...    59   5e-10

>ref|XP_002535452.1| conserved hypothetical protein [Ricinus communis]
           gi|223523063|gb|EEF26931.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 55

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 39/43 (90%), Positives = 39/43 (90%)
 Frame = -1

Query: 786 SFFGSTKRELA*KWDRGQDAAGRRRLTQVPPEPREMVAYYTAH 658
           SFFGSTK ELA KWDRGQDA GRRRLTQVP EPREMVAYYTAH
Sbjct: 13  SFFGSTKGELAQKWDRGQDAVGRRRLTQVPLEPREMVAYYTAH 55


>ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477395|gb|AES58598.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 339

 Score = 58.5 bits (140), Expect(2) = 5e-10
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 637 PPPQAELVSRVIGDHFARFGGHLSQPP 717
           P PQAELVSRVIGDHFARFGGHLSQPP
Sbjct: 54  PTPQAELVSRVIGDHFARFGGHLSQPP 80



 Score = 31.6 bits (70), Expect(2) = 5e-10
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 609 APDRRRIIGTPTP 647
           APDRRRIIGTPTP
Sbjct: 44  APDRRRIIGTPTP 56