BLASTX nr result

ID: Coptis25_contig00033248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033248
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543845.1| PREDICTED: plasma membrane ATPase 1-like [Gl...    61   7e-18
gb|AEQ27823.1| PM H+-ATPase L [Eichhornia crassipes]                   60   1e-17
ref|XP_002517457.1| H(\+)-transporting atpase plant/fungi plasma...    60   1e-17
ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana] gi|8330534...    57   4e-17
emb|CAB41144.1| H+-transporting ATPase-like protein [Arabidopsis...    57   4e-17

>ref|XP_003543845.1| PREDICTED: plasma membrane ATPase 1-like [Glycine max]
          Length = 916

 Score = 60.8 bits (146), Expect(2) = 7e-18
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 379 TRQKNFGKEACELKWVHAQRSLHGLHSPNTKMFG*RSS 266
           TR+K+FGKE  ELKW HAQR+LHGLH P TKMF  R+S
Sbjct: 829 TRKKDFGKEERELKWAHAQRTLHGLHPPETKMFNERTS 866



 Score = 54.3 bits (129), Expect(2) = 7e-18
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -3

Query: 281 RLTELHTLKGRVESVVKLKGLDIEKIQQAYTL 186
           RL ELHTLKGRVESVV+LKGL+I+ IQQAYT+
Sbjct: 885 RLRELHTLKGRVESVVRLKGLNIDTIQQAYTV 916


>gb|AEQ27823.1| PM H+-ATPase L [Eichhornia crassipes]
          Length = 956

 Score = 60.1 bits (144), Expect(2) = 1e-17
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 379 TRQKNFGKEACELKWVHAQRSLHGLHSPNTKMFG*RSS 266
           TRQK+FGKEA ELKW HAQR+LHGL  P TKMF  R++
Sbjct: 869 TRQKDFGKEARELKWAHAQRTLHGLQPPETKMFNERTN 906



 Score = 54.3 bits (129), Expect(2) = 1e-17
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 281  RLTELHTLKGRVESVVKLKGLDIEKIQQAYTL 186
            RL ELHTLKG VESVV+LKGLDI+ IQQAYT+
Sbjct: 925  RLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 956


>ref|XP_002517457.1| H(\+)-transporting atpase plant/fungi plasma membrane type,
           putative [Ricinus communis] gi|223543468|gb|EEF44999.1|
           H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative [Ricinus communis]
          Length = 762

 Score = 60.1 bits (144), Expect(2) = 1e-17
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 379 TRQKNFGKEACELKWVHAQRSLHGLHSPNTKMFG*RSS 266
           TR+K+FGKE  ELKW HAQR+LHGLH P+ KMF  RSS
Sbjct: 675 TRKKDFGKEERELKWAHAQRTLHGLHPPDIKMFNDRSS 712



 Score = 54.3 bits (129), Expect(2) = 1e-17
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 281 RLTELHTLKGRVESVVKLKGLDIEKIQQAYTL 186
           RL ELHTLKG VESVV+LKGLDI+ IQQAYT+
Sbjct: 731 RLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 762


>ref|NP_190378.2| H(+)-ATPase 4 [Arabidopsis thaliana]
           gi|83305346|sp|Q9SU58.2|PMA4_ARATH RecName: Full=ATPase
           4, plasma membrane-type; AltName: Full=Proton pump 4
           gi|26451228|dbj|BAC42716.1| putative H+-transporting
           ATPase [Arabidopsis thaliana]
           gi|332644829|gb|AEE78350.1| H(+)-ATPase 4 [Arabidopsis
           thaliana]
          Length = 960

 Score = 57.4 bits (137), Expect(2) = 4e-17
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -1

Query: 379 TRQKNFGKEACELKWVHAQRSLHGLHSPNTKMFG*RSSI 263
           TRQK+FGKE  EL+W HAQR+LHGL +P+TKMF  R+ +
Sbjct: 873 TRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHV 911



 Score = 55.5 bits (132), Expect(2) = 4e-17
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 281  RLTELHTLKGRVESVVKLKGLDIEKIQQAYTL 186
            RL ELHTLKG VESVV+LKGLDIE IQQAYT+
Sbjct: 929  RLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960


>emb|CAB41144.1| H+-transporting ATPase-like protein [Arabidopsis thaliana]
          Length = 960

 Score = 57.4 bits (137), Expect(2) = 4e-17
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -1

Query: 379 TRQKNFGKEACELKWVHAQRSLHGLHSPNTKMFG*RSSI 263
           TRQK+FGKE  EL+W HAQR+LHGL +P+TKMF  R+ +
Sbjct: 873 TRQKDFGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHV 911



 Score = 55.5 bits (132), Expect(2) = 4e-17
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 281  RLTELHTLKGRVESVVKLKGLDIEKIQQAYTL 186
            RL ELHTLKG VESVV+LKGLDIE IQQAYT+
Sbjct: 929  RLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960


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