BLASTX nr result

ID: Coptis25_contig00033245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033245
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15253.3| unnamed protein product [Vitis vinifera]              498   e-139
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   498   e-139
ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7...   485   e-135
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...   485   e-135
ref|NP_190362.2| ABC transporter A family member 7 [Arabidopsis ...   478   e-133

>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score =  498 bits (1283), Expect = e-139
 Identities = 247/286 (86%), Positives = 263/286 (91%)
 Frame = +3

Query: 3    LGPNGAGKTSFISMMTGLTMPTSGTAYVQGLDIRTNMDKIYTNMGVCPQHDLLWEVLTGR 182
            LGPNGAGKTSFISMM GLT+PTSGTA+V+GLDIR +MD IYT+MGVCPQHDLLWE LTGR
Sbjct: 643  LGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTSMGVCPQHDLLWETLTGR 702

Query: 183  EHLLFYGRLKNLKGAALTQAVKDSLKSVNLFNGGVGDKQAGKYSGGMKRRLSVAISLIGD 362
            EHLLFYGRLKNLKGAALTQAV++SLKSVNLF+GGVGDKQAGKYSGGMKRRLSVAISLIGD
Sbjct: 703  EHLLFYGRLKNLKGAALTQAVEESLKSVNLFHGGVGDKQAGKYSGGMKRRLSVAISLIGD 762

Query: 363  PKVVYMDEPSTGLDPASRNNLWTVLKRAKKGRAIILTTHSMEEAEFLCDRLGIFVDGGFQ 542
            PKVVYMDEPSTGLDPASRNNLW V+KRAK+GRAIILTTHSMEEAE LCDRLGIFVDG  Q
Sbjct: 763  PKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEVLCDRLGIFVDGSLQ 822

Query: 543  CIGNPNELKGRYGGSYVFTMTTDANQEEEVGKLVRRFSPNANRIYHISGTQKFELPKQEV 722
            CIGNP ELK RYGGSYVFTMTT +N EEEV  LVR+ SPN N+IY ISGTQKFELPKQEV
Sbjct: 823  CIGNPKELKARYGGSYVFTMTTSSNHEEEVENLVRQLSPNTNKIYQISGTQKFELPKQEV 882

Query: 723  RIADVFQAVEKAKSMLTIYAWGLADTTLEDVFIKVARTAQSFNTLS 860
            RIADVFQAVE AKS  T+ AWGLADTTLEDVFIKVAR AQ+F+ LS
Sbjct: 883  RIADVFQAVENAKSRFTVQAWGLADTTLEDVFIKVARGAQAFDVLS 928


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  498 bits (1283), Expect = e-139
 Identities = 247/286 (86%), Positives = 263/286 (91%)
 Frame = +3

Query: 3    LGPNGAGKTSFISMMTGLTMPTSGTAYVQGLDIRTNMDKIYTNMGVCPQHDLLWEVLTGR 182
            LGPNGAGKTSFISMM GLT+PTSGTA+V+GLDIR +MD IYT+MGVCPQHDLLWE LTGR
Sbjct: 664  LGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTSMGVCPQHDLLWETLTGR 723

Query: 183  EHLLFYGRLKNLKGAALTQAVKDSLKSVNLFNGGVGDKQAGKYSGGMKRRLSVAISLIGD 362
            EHLLFYGRLKNLKGAALTQAV++SLKSVNLF+GGVGDKQAGKYSGGMKRRLSVAISLIGD
Sbjct: 724  EHLLFYGRLKNLKGAALTQAVEESLKSVNLFHGGVGDKQAGKYSGGMKRRLSVAISLIGD 783

Query: 363  PKVVYMDEPSTGLDPASRNNLWTVLKRAKKGRAIILTTHSMEEAEFLCDRLGIFVDGGFQ 542
            PKVVYMDEPSTGLDPASRNNLW V+KRAK+GRAIILTTHSMEEAE LCDRLGIFVDG  Q
Sbjct: 784  PKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEVLCDRLGIFVDGSLQ 843

Query: 543  CIGNPNELKGRYGGSYVFTMTTDANQEEEVGKLVRRFSPNANRIYHISGTQKFELPKQEV 722
            CIGNP ELK RYGGSYVFTMTT +N EEEV  LVR+ SPN N+IY ISGTQKFELPKQEV
Sbjct: 844  CIGNPKELKARYGGSYVFTMTTSSNHEEEVENLVRQLSPNTNKIYQISGTQKFELPKQEV 903

Query: 723  RIADVFQAVEKAKSMLTIYAWGLADTTLEDVFIKVARTAQSFNTLS 860
            RIADVFQAVE AKS  T+ AWGLADTTLEDVFIKVAR AQ+F+ LS
Sbjct: 904  RIADVFQAVENAKSRFTVQAWGLADTTLEDVFIKVARGAQAFDVLS 949


>ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7-like [Cucumis sativus]
            gi|449477292|ref|XP_004154983.1| PREDICTED: ABC
            transporter A family member 7-like [Cucumis sativus]
          Length = 947

 Score =  485 bits (1249), Expect = e-135
 Identities = 236/286 (82%), Positives = 260/286 (90%)
 Frame = +3

Query: 3    LGPNGAGKTSFISMMTGLTMPTSGTAYVQGLDIRTNMDKIYTNMGVCPQHDLLWEVLTGR 182
            LGPNGAGKTSFISMM GLT P++G AYVQG+DIR +MD+IYT+MGVCPQHDLLWE LTGR
Sbjct: 662  LGPNGAGKTSFISMMIGLTKPSAGAAYVQGMDIRRDMDRIYTSMGVCPQHDLLWEQLTGR 721

Query: 183  EHLLFYGRLKNLKGAALTQAVKDSLKSVNLFNGGVGDKQAGKYSGGMKRRLSVAISLIGD 362
            EHLLFYGRLK L+G+ALT+AV++SLK VNL++GG+ DKQAGKYSGGMKRRLSVAISLIGD
Sbjct: 722  EHLLFYGRLKKLRGSALTEAVEESLKGVNLYHGGIADKQAGKYSGGMKRRLSVAISLIGD 781

Query: 363  PKVVYMDEPSTGLDPASRNNLWTVLKRAKKGRAIILTTHSMEEAEFLCDRLGIFVDGGFQ 542
            PKVVYMDEPSTGLDPASRN+LW V+K AK+ RAIILTTHSMEEAE LCDRLGIFVDGG Q
Sbjct: 782  PKVVYMDEPSTGLDPASRNSLWNVVKHAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGLQ 841

Query: 543  CIGNPNELKGRYGGSYVFTMTTDANQEEEVGKLVRRFSPNANRIYHISGTQKFELPKQEV 722
            CIGNP ELKGRYGGSYVFTMTT AN E +V  +V+  SPNA++IYHISGTQKFELPKQEV
Sbjct: 842  CIGNPKELKGRYGGSYVFTMTTSANHEVDVENMVKNLSPNASKIYHISGTQKFELPKQEV 901

Query: 723  RIADVFQAVEKAKSMLTIYAWGLADTTLEDVFIKVARTAQSFNTLS 860
            RI DVFQAVE AKS  T++AWGLADTTLEDVFIKVAR AQSFNTLS
Sbjct: 902  RIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQSFNTLS 947


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score =  485 bits (1249), Expect = e-135
 Identities = 240/286 (83%), Positives = 259/286 (90%)
 Frame = +3

Query: 3    LGPNGAGKTSFISMMTGLTMPTSGTAYVQGLDIRTNMDKIYTNMGVCPQHDLLWEVLTGR 182
            LGPNGAGKTSFI+MM GLT PTSGTAYVQGLD+RT+MD IYT+MGVCPQHDLLWE LTGR
Sbjct: 664  LGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDLRTHMDGIYTSMGVCPQHDLLWESLTGR 723

Query: 183  EHLLFYGRLKNLKGAALTQAVKDSLKSVNLFNGGVGDKQAGKYSGGMKRRLSVAISLIGD 362
            EHLLFYGRLKNLKG+ALTQAV++SLKSVNLF+GGV DKQAGKYSGGMKRRLSVAISLIGD
Sbjct: 724  EHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGD 783

Query: 363  PKVVYMDEPSTGLDPASRNNLWTVLKRAKKGRAIILTTHSMEEAEFLCDRLGIFVDGGFQ 542
            PKVVYMDEPSTGLDPASR NLW V+KRAK+ RAIILTTHSMEEAE LCDRLGIFVDGG Q
Sbjct: 784  PKVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGLQ 843

Query: 543  CIGNPNELKGRYGGSYVFTMTTDANQEEEVGKLVRRFSPNANRIYHISGTQKFELPKQEV 722
            CIGNP ELK RYGG+YVFTMTT  + E +V  LVR+  PNAN+IYHISGTQKFELPK EV
Sbjct: 844  CIGNPKELKARYGGTYVFTMTTSIDHENDVENLVRQLFPNANKIYHISGTQKFELPKDEV 903

Query: 723  RIADVFQAVEKAKSMLTIYAWGLADTTLEDVFIKVARTAQSFNTLS 860
            +IA+VFQAVE AK   T+ AWGLADTTLEDVFIKVAR AQ+FNTLS
Sbjct: 904  KIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFNTLS 949


>ref|NP_190362.2| ABC transporter A family member 7 [Arabidopsis thaliana]
            gi|109818470|sp|Q9STT5.2|AB7A_ARATH RecName: Full=ABC
            transporter A family member 7; Short=ABC transporter
            ABCA.7; Short=AtABCA7; AltName: Full=Probable ABC2
            homolog 6 gi|332644807|gb|AEE78328.1| ABC transporter A
            family member 7 [Arabidopsis thaliana]
          Length = 935

 Score =  478 bits (1231), Expect = e-133
 Identities = 233/286 (81%), Positives = 256/286 (89%)
 Frame = +3

Query: 3    LGPNGAGKTSFISMMTGLTMPTSGTAYVQGLDIRTNMDKIYTNMGVCPQHDLLWEVLTGR 182
            LGPNGAGKTSFI+MMTGL  PTSGTA VQGLDI  +MD++YT+MGVCPQHDLLWE LTGR
Sbjct: 650  LGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICNDMDRVYTSMGVCPQHDLLWETLTGR 709

Query: 183  EHLLFYGRLKNLKGAALTQAVKDSLKSVNLFNGGVGDKQAGKYSGGMKRRLSVAISLIGD 362
            EHLLFYGRLKNLKGA L QAV++SLKSVNLF+GGV DK AGKYSGGMKRRLSVAISLIG+
Sbjct: 710  EHLLFYGRLKNLKGADLNQAVEESLKSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGN 769

Query: 363  PKVVYMDEPSTGLDPASRNNLWTVLKRAKKGRAIILTTHSMEEAEFLCDRLGIFVDGGFQ 542
            PKVVYMDEPSTGLDPASR NLWTV+KRAK+  AIILTTHSMEEAEFLCDRLGIFVDGG Q
Sbjct: 770  PKVVYMDEPSTGLDPASRKNLWTVIKRAKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQ 829

Query: 543  CIGNPNELKGRYGGSYVFTMTTDANQEEEVGKLVRRFSPNANRIYHISGTQKFELPKQEV 722
            CIGNP ELKGRYGGSYVFTMTT +  E+ V KL++  SPNA +IYHI+GTQKFELPK+EV
Sbjct: 830  CIGNPKELKGRYGGSYVFTMTTSSEHEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEV 889

Query: 723  RIADVFQAVEKAKSMLTIYAWGLADTTLEDVFIKVARTAQSFNTLS 860
            RI++VFQAVEKAKS  T++AWGLADTTLEDVFIKV R  Q+FN  S
Sbjct: 890  RISEVFQAVEKAKSNFTVFAWGLADTTLEDVFIKVVRNGQAFNVFS 935


Top