BLASTX nr result

ID: Coptis25_contig00033230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033230
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525845.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002525845.1| conserved hypothetical protein [Ricinus communis]
           gi|223534850|gb|EEF36539.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/136 (36%), Positives = 73/136 (53%)
 Frame = -2

Query: 433 ICSRFELVGQENYVGSFNKLIQVGTVDEYFEHFEELQALMVSKNKQFSEDYFVLSFLSAL 254
           +C RF  V   + V   N++ QVG+V  Y E FEEL++LM+  N    E YF+ SF+S L
Sbjct: 129 LCRRFGKVIVSDIVEESNRIQQVGSVINYQERFEELRSLMLKYNPMPDESYFMSSFVSGL 188

Query: 253 KEELKASVQMFKPTTLSSALYLARMQETALEAQVKRAAKPIQRNFTNTTSYFYTPPFQNK 74
            EE+++ V++ K  TLS A   A++ E ++EA  KR        F   T+  Y  P ++ 
Sbjct: 189 NEEIRSMVKLLKLATLSQAYERAKLYEKSIEAMFKR------HKFLPKTN--YQQPCKSN 240

Query: 73  LPQTSIPTPKVPFNTT 26
             + S PTP   +  T
Sbjct: 241 FTKNSTPTPSFLYRPT 256


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
 Frame = -2

Query: 439 EVICSRFELVGQENYVGSFNKLIQVGTVDEYFEHFEELQALMVSKNKQFSEDYFVLSFLS 260
           + ICSRF    +++ V  FNKL Q G ++EY E FEEL++LM S N    E Y++ SF+S
Sbjct: 171 KAICSRFG--SRDDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESYYISSFIS 228

Query: 259 ALKEELKASVQMFKPTTLSSALYLARMQETA---LEAQVKRAAKPIQ-----RNFTNTTS 104
            LKE++K  +++ KP TL +A   A+ QE +   L  + +   KP+      R+F N  S
Sbjct: 229 GLKEDIKPMLKILKPGTLMTAFDQAKWQEESNNILARKSRFTTKPVMGGQGGRSFGNQQS 288

Query: 103 YF 98
            +
Sbjct: 289 NY 290


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/111 (39%), Positives = 71/111 (63%)
 Frame = -2

Query: 439 EVICSRFELVGQENYVGSFNKLIQVGTVDEYFEHFEELQALMVSKNKQFSEDYFVLSFLS 260
           +++C RF    +E+ V  FNKLIQ  +VD+Y + FEEL++LM + N   +E Y+V SF++
Sbjct: 194 QILCRRFG--SREDSVEEFNKLIQDKSVDDYIKRFEELRSLMSALNSSLTEFYYVSSFIN 251

Query: 259 ALKEELKASVQMFKPTTLSSALYLARMQETALEAQVKRAAKPIQRNFTNTT 107
            LKE++K  +++ KP  +  A   AR QE +  A  +R ++ +QR  +NTT
Sbjct: 252 GLKEDIKPMLKILKPANVLMAFEQARWQEKSNNALTRR-SRLVQR--SNTT 299


>ref|XP_002337925.1| predicted protein [Populus trichocarpa] gi|222870020|gb|EEF07151.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 56/87 (64%)
 Frame = -2

Query: 433 ICSRFELVGQENYVGSFNKLIQVGTVDEYFEHFEELQALMVSKNKQFSEDYFVLSFLSAL 254
           ICSRF    + + V  FNKL+Q G VDEY + FEEL++LM S N    E Y++ SF+S L
Sbjct: 161 ICSRFG--NRTDIVEEFNKLMQEGDVDEYVKRFEELKSLMHSLNSLLPESYYISSFISGL 218

Query: 253 KEELKASVQMFKPTTLSSALYLARMQE 173
           KE++K  +++ KP TL  A   A+ QE
Sbjct: 219 KEDIKPMLKILKPVTLMIAFDQAKWQE 245


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = -2

Query: 433 ICSRFELVGQENYVGSFNKLIQVGTVDEYFEHFEELQALMVSKNKQFSEDYFVLSFLSAL 254
           IC+RF    +   V  FNKL+Q G VDEY E FEEL++LM S N    E Y++ SF+S L
Sbjct: 122 ICNRFG--NRTAIVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESYYISSFISGL 179

Query: 253 KEELKASVQMFKPTTLSSALYLARMQE 173
           KE++K  +++ KP TL  A   A+ QE
Sbjct: 180 KEDIKPMLKILKPVTLMIAFDQAKWQE 206


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