BLASTX nr result

ID: Coptis25_contig00033221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033221
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22591.3| unnamed protein product [Vitis vinifera]              284   9e-75
ref|XP_002513617.1| conserved hypothetical protein [Ricinus comm...   273   2e-71
emb|CAN70840.1| hypothetical protein VITISV_038886 [Vitis vinifera]   272   3e-71
gb|AFK42630.1| unknown [Lotus japonicus]                              254   6e-66
gb|AFW68599.1| hypothetical protein ZEAMMB73_630847 [Zea mays]        252   4e-65

>emb|CBI22591.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  284 bits (726), Expect = 9e-75
 Identities = 137/186 (73%), Positives = 159/186 (85%)
 Frame = -3

Query: 563 MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 384
           ME M YAEELVREFLVFRGFTNTLQA++ EL TDIGKGF VDKILDL+F VY+PKFQA++
Sbjct: 1   MEKMQYAEELVREFLVFRGFTNTLQAFEGELCTDIGKGFQVDKILDLIFSVYIPKFQAEK 60

Query: 383 LVALLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLL 204
           LV LLSFFKQ  S+S+E VL++++SKLE SILRYYIV AIQSGR ++V+EF G +GNDLL
Sbjct: 61  LVCLLSFFKQCFSSSSETVLIATLSKLEVSILRYYIVHAIQSGRTERVIEFFGMNGNDLL 120

Query: 203 QRGQDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRLSFRNFLSEIFNGTRIPSLLKIS 24
           QRGQDW PWFA+PYLKNPSLDPQFRI+FS+EW + LRLS RNFL       RIP+LLKI 
Sbjct: 121 QRGQDWTPWFAVPYLKNPSLDPQFRIYFSREWLEALRLSVRNFLKVSLTYPRIPALLKIC 180

Query: 23  TEKNTV 6
           +EKNTV
Sbjct: 181 SEKNTV 186


>ref|XP_002513617.1| conserved hypothetical protein [Ricinus communis]
           gi|223547525|gb|EEF49020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 655

 Score =  273 bits (697), Expect = 2e-71
 Identities = 138/187 (73%), Positives = 156/187 (83%), Gaps = 1/187 (0%)
 Frame = -3

Query: 563 MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 384
           MENM YAEELVREFLVFRGFTNTLQA+  ELSTDIGKGF VDK+LDL+F  Y+PK QAD+
Sbjct: 1   MENMQYAEELVREFLVFRGFTNTLQAFDIELSTDIGKGFQVDKLLDLIFSNYIPKLQADK 60

Query: 383 LVALLSFFKQYVSTS-TEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDL 207
           LV+LL FFKQ  S+S +E  LVS++SKLE S+LRYYIV AIQSGRKDKVVEF G +GNDL
Sbjct: 61  LVSLLYFFKQCFSSSLSETALVSTLSKLEVSLLRYYIVYAIQSGRKDKVVEFFGINGNDL 120

Query: 206 LQRGQDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRLSFRNFLSEIFNGTRIPSLLKI 27
           LQ+  DW PWFAIPYLKNPSLDPQFR++FSKEW + LRLS  NFLSEIFNGT I   L  
Sbjct: 121 LQKNADWTPWFAIPYLKNPSLDPQFRVYFSKEWCEALRLSVMNFLSEIFNGTHI---LFQ 177

Query: 26  STEKNTV 6
            +EKNT+
Sbjct: 178 GSEKNTI 184


>emb|CAN70840.1| hypothetical protein VITISV_038886 [Vitis vinifera]
          Length = 519

 Score =  272 bits (696), Expect = 3e-71
 Identities = 129/167 (77%), Positives = 149/167 (89%)
 Frame = -3

Query: 554 MVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADRLVA 375
           M YAEELVREFLVFRGFTNTLQA++ EL TDIGKGF VDKILDL+F VY+PKFQA++LV 
Sbjct: 1   MQYAEELVREFLVFRGFTNTLQAFEGELCTDIGKGFQVDKILDLIFSVYIPKFQAEKLVC 60

Query: 374 LLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLLQRG 195
           LLSFFKQ  S+S+E VL++++SKLE SILRYYIV AIQSGR ++V+EF G +GNDLLQRG
Sbjct: 61  LLSFFKQCFSSSSETVLIATLSKLEVSILRYYIVHAIQSGRTERVIEFFGMNGNDLLQRG 120

Query: 194 QDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRLSFRNFLSEIFNG 54
           QDW PWFA+PYLKNPSLDPQFRI+FS+EW + LRLS RNFLSEIFNG
Sbjct: 121 QDWTPWFAVPYLKNPSLDPQFRIYFSREWLEALRLSVRNFLSEIFNG 167


>gb|AFK42630.1| unknown [Lotus japonicus]
          Length = 199

 Score =  254 bits (650), Expect = 6e-66
 Identities = 122/170 (71%), Positives = 140/170 (82%)
 Frame = -3

Query: 554 MVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADRLVA 375
           M YAEELVREFLVFRGFTNTL+AY+TEL TDIGKGF VDKILDL+F VYVPKFQ ++LVA
Sbjct: 3   MEYAEELVREFLVFRGFTNTLEAYETELRTDIGKGFQVDKILDLIFSVYVPKFQGEKLVA 62

Query: 374 LLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLLQRG 195
           LL FFK YVS+S+E  LVS++SKLEASILR+Y+V A+QS R+DKVVEF   +G +L+Q  
Sbjct: 63  LLGFFKHYVSSSSETALVSTLSKLEASILRFYVVYALQSNRRDKVVEFFAANGAELVQSS 122

Query: 194 QDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRLSFRNFLSEIFNGTRI 45
           QDW  WFAIPY KNP  DP+FR FFSKEW+  L LS RNF SEIFN T I
Sbjct: 123 QDWTHWFAIPYTKNPQTDPEFRTFFSKEWYQALHLSVRNFFSEIFNATHI 172


>gb|AFW68599.1| hypothetical protein ZEAMMB73_630847 [Zea mays]
          Length = 622

 Score =  252 bits (643), Expect = 4e-65
 Identities = 122/187 (65%), Positives = 152/187 (81%)
 Frame = -3

Query: 563 MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 384
           MENM YAEELVREFLVFRGFT+TLQAY+TELST+IG+ F  DKI+DLVF  YVPK+Q D+
Sbjct: 1   MENMRYAEELVREFLVFRGFTSTLQAYETELSTEIGRNFQGDKIVDLVFSEYVPKYQLDK 60

Query: 383 LVALLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLL 204
           L+ L +FFKQ   +  +  L S++ KLE S+LRYY++ A++SGR+DKV+EF G SGN L+
Sbjct: 61  LLGLFAFFKQCFMSPADTELFSTLVKLELSVLRYYVINALKSGRQDKVIEFFGESGNYLM 120

Query: 203 QRGQDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRLSFRNFLSEIFNGTRIPSLLKIS 24
           Q+  DW+ WFAIPY+KNPSLDPQFR++FSKEW D L LSFRNFLS IFN T    L++IS
Sbjct: 121 QKRGDWLAWFAIPYIKNPSLDPQFRLYFSKEWLDTLVLSFRNFLSGIFNDT---PLMRIS 177

Query: 23  TEKNTVK 3
           +EKNT+K
Sbjct: 178 SEKNTIK 184


Top