BLASTX nr result

ID: Coptis25_contig00033215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033215
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13153.1| putative gag polyprotein [Phaseolus vulgaris]           61   1e-07
emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]    60   2e-07
emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]    60   2e-07
emb|CAN76528.1| hypothetical protein VITISV_017594 [Vitis vinifera]    60   2e-07
emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]    59   3e-07

>gb|AER13153.1| putative gag polyprotein [Phaseolus vulgaris]
          Length = 1153

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/80 (36%), Positives = 44/80 (55%)
 Frame = -3

Query: 258 DWYYRLSSRSISRFEELERAFVDHFIHQKRRVVDIAALFNIKQRSAESLREFLCRFKEET 79
           DW+  L   SI+  E   + F+ HF   K + ++ A LF +KQ   ES+++FLCRF E  
Sbjct: 95  DWFNNLFEGSITLLEVFTKLFISHFAVSKAKPLEFANLFEVKQAMKESIKQFLCRFSEVM 154

Query: 78  LRVENLEEHTAVIAFQHGLK 19
           +++    E   V AF  GL+
Sbjct: 155 VQIPQPNERMFVEAFIRGLR 174


>emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]
          Length = 549

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 45/82 (54%)
 Frame = -3

Query: 255 WYYRLSSRSISRFEELERAFVDHFIHQKRRVVDIAALFNIKQRSAESLREFLCRFKEETL 76
           W++RL S S+  F +L  AFV  ++   R   +I+ L NIK R  ESLREF+ RF +  L
Sbjct: 69  WFHRLPSNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDNESLREFVKRFGQAVL 128

Query: 75  RVENLEEHTAVIAFQHGLKQGT 10
           ++E       +  F+  +  GT
Sbjct: 129 QIEACSMDAVLQIFKRSICPGT 150


>emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]
          Length = 549

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 255 WYYRLSSRSISRFEELERAFVDHFIHQKRRVVDIAALFNIKQRSAESLREFLCRFKEETL 76
           W++RL   SI  F +L  AFV  ++   R   +I+ L NIK R +ESLREF+ RF +  L
Sbjct: 69  WFHRLPPNSIDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDSESLREFVKRFGQAVL 128

Query: 75  RVENLEEHTAVIAFQHGLKQGT 10
           ++E    +  +  F+  +  GT
Sbjct: 129 QIEVCSMNAVLQIFKRSICPGT 150


>emb|CAN76528.1| hypothetical protein VITISV_017594 [Vitis vinifera]
          Length = 477

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/82 (35%), Positives = 46/82 (56%)
 Frame = -3

Query: 255 WYYRLSSRSISRFEELERAFVDHFIHQKRRVVDIAALFNIKQRSAESLREFLCRFKEETL 76
           W++RL   S+  F +L  AFV  ++   R   +I+ L+NIK +  +SLREF+ RF +  L
Sbjct: 69  WFHRLPPNSVGNFRDLSEAFVGQYLCSARHKQNISTLYNIKMQDNQSLREFVKRFGQAVL 128

Query: 75  RVENLEEHTAVIAFQHGLKQGT 10
           +VE     T +  F+  +  GT
Sbjct: 129 QVEACSMDTVLQIFKRSICPGT 150


>emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]
          Length = 986

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)
 Frame = -3

Query: 255 WYYRLSSRSISRFEELERAFVDHFIHQKRRVVDIAALFNIKQRSAESLREFLCRFKEETL 76
           W++RLS+ SI  F +L   FV  ++   R   +I+ L NIK + +E+LREF+ RF +  L
Sbjct: 471 WFHRLSANSIDNFRDLSEVFVGQYLCSARHKQNISTLQNIKMQESETLREFVKRFGQAVL 530

Query: 75  RVENLEEHTAVIAFQHGLKQGT 10
           +VE+      +  F+  +  GT
Sbjct: 531 QVESYNMDAILQIFKRSICPGT 552


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