BLASTX nr result

ID: Coptis25_contig00033207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033207
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275939.2| PREDICTED: uncharacterized protein LOC100244...   136   2e-30
emb|CBI25305.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002879663.1| hypothetical protein ARALYDRAFT_321443 [Arab...   132   4e-29
ref|NP_181273.3| uncharacterized protein [Arabidopsis thaliana] ...   131   5e-29
gb|AAC98056.1| hypothetical protein [Arabidopsis thaliana]            131   5e-29

>ref|XP_002275939.2| PREDICTED: uncharacterized protein LOC100244989 [Vitis vinifera]
          Length = 699

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/89 (76%), Positives = 77/89 (86%)
 Frame = -1

Query: 267 MSWLRSAVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKI 88
           MSWLRSAV+KAVEVG  N LTRTVK  +DSVVQHAG AV+EGAKI+QDRIG RS +SF++
Sbjct: 1   MSWLRSAVSKAVEVGNKNNLTRTVKNYADSVVQHAGQAVAEGAKILQDRIGARSYRSFRL 60

Query: 87  TVKRLEELSVSCRGLERIQLLRRWLVALK 1
           TVKRLEE +VSCRG ERIQLL+RWL  LK
Sbjct: 61  TVKRLEEAAVSCRGPERIQLLKRWLAVLK 89


>emb|CBI25305.3| unnamed protein product [Vitis vinifera]
          Length = 680

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/89 (76%), Positives = 77/89 (86%)
 Frame = -1

Query: 267 MSWLRSAVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKI 88
           MSWLRSAV+KAVEVG  N LTRTVK  +DSVVQHAG AV+EGAKI+QDRIG RS +SF++
Sbjct: 1   MSWLRSAVSKAVEVGNKNNLTRTVKNYADSVVQHAGQAVAEGAKILQDRIGARSYRSFRL 60

Query: 87  TVKRLEELSVSCRGLERIQLLRRWLVALK 1
           TVKRLEE +VSCRG ERIQLL+RWL  LK
Sbjct: 61  TVKRLEEAAVSCRGPERIQLLKRWLAVLK 89


>ref|XP_002879663.1| hypothetical protein ARALYDRAFT_321443 [Arabidopsis lyrata subsp.
           lyrata] gi|297325502|gb|EFH55922.1| hypothetical protein
           ARALYDRAFT_321443 [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  132 bits (331), Expect = 4e-29
 Identities = 67/89 (75%), Positives = 77/89 (86%)
 Frame = -1

Query: 267 MSWLRSAVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKI 88
           MSWLRSAVNKAVEVGG N +TRTV+  +DSVV  AG AVSEGAK+IQDRIG R+++SF +
Sbjct: 1   MSWLRSAVNKAVEVGGKNNITRTVRNYADSVVLTAGNAVSEGAKLIQDRIGSRNVKSFSL 60

Query: 87  TVKRLEELSVSCRGLERIQLLRRWLVALK 1
            VKRLEE+SVS RG ER+QLLRRWLVALK
Sbjct: 61  AVKRLEEVSVSSRGGERVQLLRRWLVALK 89


>ref|NP_181273.3| uncharacterized protein [Arabidopsis thaliana]
           gi|330254295|gb|AEC09389.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 669

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/89 (74%), Positives = 77/89 (86%)
 Frame = -1

Query: 267 MSWLRSAVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKI 88
           MSWLRSAVNKAVEVGG N +TRTV+  +DSVV  AG AVSEGAK+IQDRIG R+++SF +
Sbjct: 1   MSWLRSAVNKAVEVGGKNNITRTVRNYADSVVLTAGNAVSEGAKLIQDRIGSRNVKSFSL 60

Query: 87  TVKRLEELSVSCRGLERIQLLRRWLVALK 1
            VKRLEE+SVS RG ER+QLLRRWLVAL+
Sbjct: 61  AVKRLEEVSVSSRGSERVQLLRRWLVALR 89


>gb|AAC98056.1| hypothetical protein [Arabidopsis thaliana]
          Length = 697

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/89 (74%), Positives = 77/89 (86%)
 Frame = -1

Query: 267 MSWLRSAVNKAVEVGGNNTLTRTVKTLSDSVVQHAGLAVSEGAKIIQDRIGPRSIQSFKI 88
           MSWLRSAVNKAVEVGG N +TRTV+  +DSVV  AG AVSEGAK+IQDRIG R+++SF +
Sbjct: 1   MSWLRSAVNKAVEVGGKNNITRTVRNYADSVVLTAGNAVSEGAKLIQDRIGSRNVKSFSL 60

Query: 87  TVKRLEELSVSCRGLERIQLLRRWLVALK 1
            VKRLEE+SVS RG ER+QLLRRWLVAL+
Sbjct: 61  AVKRLEEVSVSSRGSERVQLLRRWLVALR 89


Top