BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033185
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...   399   e-109
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   382   e-104
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ...   378   e-102
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100
emb|CBI26127.3| unnamed protein product [Vitis vinifera]              365   8e-99

>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
            mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  399 bits (1026), Expect = e-109
 Identities = 188/313 (60%), Positives = 236/313 (75%)
 Frame = -2

Query: 939  VVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFESG 760
            VV  G Q S+PV NSL+DMYGKCL  + A RVF EM   NEVSWC+LLFAY   G F+  
Sbjct: 97   VVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVA 156

Query: 759  CRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSEL 580
              VF+ MP ++E+AWNI+++G+ +CG  E+C+ LFKKM+  +  PD WT++AL++A  EL
Sbjct: 157  RVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCEL 216

Query: 579  AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
             EP +G  +H  I++SGW  AV V NS+LS+Y+KL C +D +K+FESI   TQVSWN MI
Sbjct: 217  QEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMI 276

Query: 399  DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
            DAHMK+G  HEA +VFQ APEKN+VSWT+MITGY RNGH +QALSFFV M  N + PDDF
Sbjct: 277  DAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDF 336

Query: 219  TLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTDI 40
            T GAVLHACS+LA LGHG+M H  ++  GFH+Y  VGNGL+NMYAKCG+++ S  AF +I
Sbjct: 337  TFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI 396

Query: 39   SDKDLVSWNAMLF 1
              KDLVSWNAMLF
Sbjct: 397  LGKDLVSWNAMLF 409



 Score =  167 bits (424), Expect = 3e-39
 Identities = 90/265 (33%), Positives = 145/265 (54%)
 Frame = -2

Query: 798 LFAYVKFGDFESGCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDV 619
           + A  K G   S  R+F++MP++  VAWN ++A +S+ G  +  + LF  M+ +   PD 
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDR 71

Query: 618 WTYTALMSACSELAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFES 439
           +T+TA +SAC+ L E   G  +HA +V SG  S++ V NS++  Y K      A ++FE 
Sbjct: 72  FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131

Query: 438 ISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFF 259
           +S   +VSW +++ A+   GL   A VVF   P+K  ++W  MI+GY + G  +  L  F
Sbjct: 132 MSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLF 191

Query: 258 VDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKC 79
             M  + L PD +T  A+++A   L    +G M H  +++ G+     V N +L+ Y+K 
Sbjct: 192 KKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKL 251

Query: 78  GNLEESFRAFTDISDKDLVSWNAML 4
           G  ++  + F  I     VSWNAM+
Sbjct: 252 GCKDDVMKVFESIGILTQVSWNAMI 276



 Score =  117 bits (293), Expect = 4e-24
 Identities = 80/310 (25%), Positives = 134/310 (43%), Gaps = 17/310 (5%)
 Frame = -2

Query: 939  VVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFESG 760
            +++ G+  ++ V NS++  Y K        +VF  +    +VSW A++ A++K GD    
Sbjct: 229  IIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEA 288

Query: 759  CRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSEL 580
              VF   P +  V+W  ++ G++R G  E  ++ F KM  +   PD +T+ A++ ACS L
Sbjct: 289  FLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSL 348

Query: 579  AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
            A   HG+ +H  I+  G+ + V V N +++ YAK    + +   F+ I     VSWN   
Sbjct: 349  ATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWN--- 405

Query: 399  DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
                                        AM+ G   +GH  QAL  + +M  + + PD  
Sbjct: 406  ----------------------------AMLFGLGMHGHATQALELYEEMVASGMKPDKV 437

Query: 219  TLGAVLHACSNLAVLGHGRMAH-----------------CCVVRLGFHSYAYVGNGLLNM 91
            T   +L  CS+  ++  G+                    C V  LG   Y      L++ 
Sbjct: 438  TFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 497

Query: 90   YAKCGNLEES 61
            Y++ G  E S
Sbjct: 498  YSRTGRAETS 507



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 51/134 (38%), Positives = 69/134 (51%)
 Frame = -2

Query: 402 IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
           I A  K+G +  A  +F   P K+ V+W AM+  Y + G  +QAL  F  M      PD 
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDR 71

Query: 222 FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
           FT  A L AC+ L  L  G   H  VV  G  S   VGN L++MY KC +   + R F +
Sbjct: 72  FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131

Query: 42  ISDKDLVSWNAMLF 1
           +S  + VSW ++LF
Sbjct: 132 MSIMNEVSWCSLLF 145


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  382 bits (980), Expect = e-104
 Identities = 182/314 (57%), Positives = 229/314 (72%)
 Frame = -2

Query: 942  LVVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFES 763
            LV+  GY  S+PV NSL+DMYGKC     A +VF EM   NEVSWC+LLFAY   G F  
Sbjct: 96   LVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSE 155

Query: 762  GCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSE 583
               +FN MP + E+AWN ++AG  R G+ E+C+++F++M+ S   PD WTY+AL+SAC+E
Sbjct: 156  ASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTE 215

Query: 582  LAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTM 403
              E   G  +H  ++RSGWSSA+  KNS+LS YAK     DA+K+ ES    TQVSWN +
Sbjct: 216  SLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAI 275

Query: 402  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
            IDA+MK+G V+EA ++FQ  PEKN+VSWT+MITGY RNG+ ++AL FFV M  N  LPDD
Sbjct: 276  IDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDD 335

Query: 222  FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
            FT GAVLHACS+LAVLGHGRM H C +R GF +Y YVGNGL+NMYAKCG+L+ S  AF D
Sbjct: 336  FTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHD 395

Query: 42   ISDKDLVSWNAMLF 1
            I  KDLVS+NA+LF
Sbjct: 396  ICAKDLVSFNALLF 409



 Score =  151 bits (382), Expect = 2e-34
 Identities = 78/251 (31%), Positives = 136/251 (54%)
 Frame = -2

Query: 756 RVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSELA 577
           ++F++MPN+  VAWN ++  +S+ G  +  +++F +M+ +   PD +T+TA +SAC+   
Sbjct: 26  KLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATLSACAGAG 85

Query: 576 EPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMID 397
               G  +HA ++  G+ S++ V NS++  Y K      A ++F+ +    +VSW +++ 
Sbjct: 86  SFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLF 145

Query: 396 AHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDFT 217
           A+   G   EA  +F   P K  ++W  MI G  R G  +  L  F +M  +LL PD +T
Sbjct: 146 AYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWT 205

Query: 216 LGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTDIS 37
             A++ AC+       G M H  V+R G+ S     N +L++YAK G+L ++ +      
Sbjct: 206 YSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTG 265

Query: 36  DKDLVSWNAML 4
               VSWNA++
Sbjct: 266 RLTQVSWNAII 276



 Score =  116 bits (291), Expect = 7e-24
 Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 17/311 (5%)
 Frame = -2

Query: 942  LVVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFES 763
            LV+R G+  +M   NS++ +Y K    + A +V     +  +VSW A++ AY+K G    
Sbjct: 228  LVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNE 287

Query: 762  GCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSE 583
               +F  +P +  V+W  ++ G++R G  E  +  F  M ++   PD +T+ A++ ACS 
Sbjct: 288  AYLMFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSS 347

Query: 582  LAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTM 403
            LA   HGR VH C +R+G+S+ + V N +++ YAK    + ++  F  I +   VS+N  
Sbjct: 348  LAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFN-- 405

Query: 402  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
                                         A++  +  +G   +AL  + DM      PD 
Sbjct: 406  -----------------------------ALLFAFGLHGKASEALQLYEDMMTCGTKPDK 436

Query: 222  FTLGAVLHACSNLAVLGHGRM-----------------AHCCVVRLGFHSYAYVGNGLLN 94
             T   +L  CS+  ++  GR+                   C V  LG   Y      L+ 
Sbjct: 437  MTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAKELVK 496

Query: 93   MYAKCGNLEES 61
             Y+K  ++E S
Sbjct: 497  KYSKTSDVEAS 507



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 47/134 (35%), Positives = 69/134 (51%)
 Frame = -2

Query: 402 IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
           I A    G +  A  +F   P ++ V+W +MIT Y + G  ++ALS F  M      PD 
Sbjct: 12  ISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDH 71

Query: 222 FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
           FT  A L AC+       G   H  V+ LG+HS   V N L++MY KC +   + + F +
Sbjct: 72  FTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKE 131

Query: 42  ISDKDLVSWNAMLF 1
           + D + VSW ++LF
Sbjct: 132 MGDINEVSWCSLLF 145


>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355510628|gb|AES91770.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  378 bits (971), Expect = e-102
 Identities = 174/314 (55%), Positives = 229/314 (72%)
 Frame = -2

Query: 942  LVVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFES 763
            LVV  GYQ S+PV N+L+DMYGKC  P+ A +VF EM   NEV+WC+LLFAY     F+ 
Sbjct: 97   LVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDM 156

Query: 762  GCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSE 583
               +F  MP ++E+AWNI++A  +RCG+ E C++LFK+M  +   PD WT++ALMSAC+E
Sbjct: 157  AFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTE 216

Query: 582  LAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTM 403
              E  HG  +H  +++SGWS+A+ V NS++S+YAKL CH DAVK+F S  +  QVSWN +
Sbjct: 217  SMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAI 276

Query: 402  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
            IDAHMK+G   +AL+ FQ+APEKN+VSWT+MI GY RNG+   ALS F+DM RN    DD
Sbjct: 277  IDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDD 336

Query: 222  FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
               GAVLHAC++LA+L HG+M H C++ LG   Y +VGN L+NMYAKCG++E S  A   
Sbjct: 337  LVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRG 396

Query: 42   ISDKDLVSWNAMLF 1
            I+DKDLVSWN+MLF
Sbjct: 397  INDKDLVSWNSMLF 410



 Score =  146 bits (368), Expect = 8e-33
 Identities = 74/252 (29%), Positives = 138/252 (54%), Gaps = 1/252 (0%)
 Frame = -2

Query: 756 RVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKA-STCSPDVWTYTALMSACSEL 580
           ++F++MP +  VAWN ++  +SR G  +   +LF  M+  S   PD ++Y+A +++C+  
Sbjct: 26  KLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSCAGA 85

Query: 579 AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
           ++   G  +H+ +V SG+ S++ V N+++  Y K     DA K+F+ ++   +V+W +++
Sbjct: 86  SDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLL 145

Query: 399 DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
            A+        A  +F+  PEK  ++W  +I  + R G  +  L  F +M  NL  PD +
Sbjct: 146 FAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQW 205

Query: 219 TLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTDI 40
           T  A++ AC+      HG M HC V++ G+ +   V N +++ YAK     ++ + F   
Sbjct: 206 TFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSG 265

Query: 39  SDKDLVSWNAML 4
              + VSWNA++
Sbjct: 266 GAFNQVSWNAII 277



 Score =  117 bits (294), Expect = 3e-24
 Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 17/303 (5%)
 Frame = -2

Query: 939  VVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFESG 760
            V++ G+  +M V NS+V  Y K      A +VF      N+VSW A++ A++K GD +  
Sbjct: 230  VIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKA 289

Query: 759  CRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSEL 580
               F   P +  V+W  ++ G++R G  ++ ++LF  MK ++   D     A++ AC+ L
Sbjct: 290  LLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASL 349

Query: 579  AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
            A   HG+ VH+CI+  G    + V NS+++ YAK    E +      I+    VSWN+M+
Sbjct: 350  AILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSML 409

Query: 399  DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
             A    GL                            NG   +A+  F +M  + + PD+ 
Sbjct: 410  FA---FGL----------------------------NGRGNEAICMFREMVASGVRPDEV 438

Query: 219  TLGAVLHACSNLAVLGHG---------------RMAH--CCVVRLGFHSYAYVGNGLLNM 91
            T   +L  CS+L ++  G                M H  C V  LG   Y      L   
Sbjct: 439  TFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARK 498

Query: 90   YAK 82
            Y+K
Sbjct: 499  YSK 501



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = -2

Query: 387 KMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTR-NLLLPDDFTLG 211
           + G +  A  +F   PE++ V+W AM+T Y R G  +Q    F  M R +   PD+F+  
Sbjct: 17  RSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYS 76

Query: 210 AVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTDISDK 31
           A +++C+  + +  G   H  VV  G+ S   V N L++MY KC N  ++ + F +++  
Sbjct: 77  AAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYS 136

Query: 30  DLVSWNAMLF 1
           + V+W ++LF
Sbjct: 137 NEVTWCSLLF 146


>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
            mitochondrial-like [Glycine max]
          Length = 629

 Score =  370 bits (949), Expect = e-100
 Identities = 171/314 (54%), Positives = 227/314 (72%)
 Frame = -2

Query: 942  LVVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFES 763
            LVV  GY  S+PV NSL+DMYGKCLLP  A +VF E    NEV+WC+L+FAY        
Sbjct: 98   LVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYANSCRLGV 157

Query: 762  GCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSE 583
               +F  MP ++ +AWNI++ G +R G+ E C++LFK+M  S C PD WT++AL++AC+ 
Sbjct: 158  ALELFRSMPERVVIAWNIMIVGHARRGEVEACLHLFKEMCGSLCQPDQWTFSALINACAV 217

Query: 582  LAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTM 403
              E  +G  VH  +++SGWSSA+ VKNS+LS+YAKL C +DA+K+F S     QVSWN +
Sbjct: 218  SMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAI 277

Query: 402  IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
            IDAHMK+G   +A + FQ+APE+N+VSWT+MI GY RNG+ + ALS F+D+TRN +  DD
Sbjct: 278  IDAHMKLGDTQKAFLAFQKAPERNIVSWTSMIAGYTRNGNGELALSMFLDLTRNSVQLDD 337

Query: 222  FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
               GAVLHAC++LA+L HGRM H C++R G   Y YVGN L+NMYAKCG+++ S  AF D
Sbjct: 338  LVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAFHD 397

Query: 42   ISDKDLVSWNAMLF 1
            I DKDL+SWN+MLF
Sbjct: 398  ILDKDLISWNSMLF 411



 Score =  153 bits (387), Expect = 5e-35
 Identities = 78/267 (29%), Positives = 149/267 (55%), Gaps = 2/267 (0%)
 Frame = -2

Query: 798 LFAYVKFGDFESGCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDV 619
           + A  + G      ++F+++P++  VAWN ++  +S  G  +  ++LF  M+ S   PD 
Sbjct: 12  IVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGCMRISHSKPDN 71

Query: 618 WTYTALMSACSELAEPF--HGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIF 445
           ++++A+++AC+     +   G  +HA +V SG+ S++ V NS++  Y K    +DA K+F
Sbjct: 72  FSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVF 131

Query: 444 ESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALS 265
           +  S   +V+W +++ A+     +  AL +F+  PE+ +++W  MI G+ R G  +  L 
Sbjct: 132 DETSDSNEVTWCSLMFAYANSCRLGVALELFRSMPERVVIAWNIMIVGHARRGEVEACLH 191

Query: 264 FFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYA 85
            F +M  +L  PD +T  A+++AC+    + +G M H  V++ G+ S   V N +L+ YA
Sbjct: 192 LFKEMCGSLCQPDQWTFSALINACAVSMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYA 251

Query: 84  KCGNLEESFRAFTDISDKDLVSWNAML 4
           K    +++ + F      + VSWNA++
Sbjct: 252 KLECQDDAMKVFNSFGCFNQVSWNAII 278



 Score =  115 bits (288), Expect = 2e-23
 Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 17/303 (5%)
 Frame = -2

Query: 939  VVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFESG 760
            V++ G+  +M V NS++  Y K      A +VF      N+VSW A++ A++K GD +  
Sbjct: 231  VIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKA 290

Query: 759  CRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSEL 580
               F   P +  V+W  ++AG++R G  E+ +++F  +  ++   D     A++ AC+ L
Sbjct: 291  FLAFQKAPERNIVSWTSMIAGYTRNGNGELALSMFLDLTRNSVQLDDLVAGAVLHACASL 350

Query: 579  AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
            A   HGR VH CI+R G    + V NS+++ YAK    + +   F  I     +SWN+M+
Sbjct: 351  AILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAFHDILDKDLISWNSML 410

Query: 399  DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
             A    GL                            +G   +A+  + +M  + + PD+ 
Sbjct: 411  FA---FGL----------------------------HGRANEAICLYREMVASGVKPDEV 439

Query: 219  TLGAVLHACSNLAVLGHG-----------RMAH------CCVVRLGFHSYAYVGNGLLNM 91
            T   +L  CS+L ++  G            ++H      C V  LG   Y      L   
Sbjct: 440  TFTGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMDHVACMVDMLGRGGYVAEARSLAEK 499

Query: 90   YAK 82
            Y+K
Sbjct: 500  YSK 502



 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
 Frame = -2

Query: 402 IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
           I A  + G + +A  +F   P K+ V+W AM+T Y   G  +Q+LS F  M  +   PD+
Sbjct: 12  IVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGCMRISHSKPDN 71

Query: 222 FTLGAVLHACS--NLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAF 49
           F+  AVL+AC+    + +  G   H  VV  G+ S   V N L++MY KC   +++ + F
Sbjct: 72  FSFSAVLNACACAGASYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVF 131

Query: 48  TDISDKDLVSWNAMLF 1
            + SD + V+W +++F
Sbjct: 132 DETSDSNEVTWCSLMF 147


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  365 bits (937), Expect = 8e-99
 Identities = 177/313 (56%), Positives = 222/313 (70%)
 Frame = -2

Query: 939 VVRFGYQFSMPVCNSLVDMYGKCLLPSRASRVF*EMEQRNEVSWCALLFAYVKFGDFESG 760
           VV  G Q S+PV NSL+DMYGKCL  + A RVF EM   NEVSWC+LLFAY   G F+  
Sbjct: 97  VVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVA 156

Query: 759 CRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDVWTYTALMSACSEL 580
             VF+ MP ++E+AWNI+++G+ +CG  E+C+ LFKKM+  +  PD WT++AL++A  EL
Sbjct: 157 RVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCEL 216

Query: 579 AEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFESISSPTQVSWNTMI 400
            EP +G  +H  I++SGW                    +D +K+FESI   TQVSWN MI
Sbjct: 217 QEPSYGYMMHGFIIKSGW--------------------DDVMKVFESIGILTQVSWNAMI 256

Query: 399 DAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDDF 220
           DAHMK+G  HEA +VFQ APEKN+VSWT+MITGY RNGH +QALSFFV M  N + PDDF
Sbjct: 257 DAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDF 316

Query: 219 TLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTDI 40
           T GAVLHACS+LA LGHG+M H  ++  GFH+Y  VGNGL+NMYAKCG+++ S  AF +I
Sbjct: 317 TFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI 376

Query: 39  SDKDLVSWNAMLF 1
             KDLVSWNAMLF
Sbjct: 377 LGKDLVSWNAMLF 389



 Score =  159 bits (401), Expect = 1e-36
 Identities = 88/276 (31%), Positives = 147/276 (53%), Gaps = 11/276 (3%)
 Frame = -2

Query: 798 LFAYVKFGDFESGCRVFNDMPNQIEVAWNILMAGFSRCGQTEMCMNLFKKMKASTCSPDV 619
           + A  K G   S  R+F++MP++  VAWN ++A +S+ G  +  + LF  M+ +   PD 
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDR 71

Query: 618 WTYTALMSACSELAEPFHGRAVHACIVRSGWSSAVAVKNSVLSYYAKLSCHEDAVKIFES 439
           +T+TA +SAC+ L E   G  +HA +V SG  S++ V NS++  Y K      A ++FE 
Sbjct: 72  FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131

Query: 438 ISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFF 259
           +S   +VSW +++ A+   GL   A VVF   P+K  ++W  MI+GY + G  +  L  F
Sbjct: 132 MSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLF 191

Query: 258 VDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYV----------- 112
             M  + L PD +T  A+++A   L    +G M H  +++ G+     V           
Sbjct: 192 KKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVS 251

Query: 111 GNGLLNMYAKCGNLEESFRAFTDISDKDLVSWNAML 4
            N +++ + K G+  E+F  F    +K++VSW +M+
Sbjct: 252 WNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMI 287



 Score =  106 bits (265), Expect = 7e-21
 Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
 Frame = -2

Query: 849 RVF*EMEQRNEVSWCALLFAYVKFGDFESGCRVFNDMPNQIEVAWNILMAGFSRCGQTEM 670
           +VF  +    +VSW A++ A++K GD      VF   P +  V+W  ++ G++R G  E 
Sbjct: 239 KVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQ 298

Query: 669 CMNLFKKMKASTCSPDVWTYTALMSACSELAEPFHGRAVHACIVRSGWSSAVAVKNSVLS 490
            ++ F KM  +   PD +T+ A++ ACS LA   HG+ +H  I+  G+ + V V N +++
Sbjct: 299 ALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVN 358

Query: 489 YYAKLSCHEDAVKIFESISSPTQVSWNTMIDAHMKMGLVHEALVVFQRAPEKNMVSWTAM 310
            YAK    + +   F+ I     VSWN                               AM
Sbjct: 359 MYAKCGDIQGSNTAFKEILGKDLVSWN-------------------------------AM 387

Query: 309 ITGYMRNGHEKQALSFFVDMTRNLLLPDDFTLGAVLHACSNLAVLGHGRMAH-------- 154
           + G   +GH  QAL  + +M  + + PD  T   +L  CS+  ++  G+           
Sbjct: 388 LFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYG 447

Query: 153 ---------CCVVRLGFHSYAYVGNGLLNMYAKCGNLEES 61
                    C V  LG   Y      L++ Y++ G  E S
Sbjct: 448 LSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETS 487



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 51/134 (38%), Positives = 69/134 (51%)
 Frame = -2

Query: 402 IDAHMKMGLVHEALVVFQRAPEKNMVSWTAMITGYMRNGHEKQALSFFVDMTRNLLLPDD 223
           I A  K+G +  A  +F   P K+ V+W AM+  Y + G  +QAL  F  M      PD 
Sbjct: 12  IVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDR 71

Query: 222 FTLGAVLHACSNLAVLGHGRMAHCCVVRLGFHSYAYVGNGLLNMYAKCGNLEESFRAFTD 43
           FT  A L AC+ L  L  G   H  VV  G  S   VGN L++MY KC +   + R F +
Sbjct: 72  FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131

Query: 42  ISDKDLVSWNAMLF 1
           +S  + VSW ++LF
Sbjct: 132 MSIMNEVSWCSLLF 145