BLASTX nr result

ID: Coptis25_contig00033164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033164
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002533623.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
emb|CBI37224.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246...   116   2e-24
emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]   116   2e-24

>ref|XP_002301834.1| predicted protein [Populus trichocarpa] gi|222843560|gb|EEE81107.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/68 (85%), Positives = 62/68 (91%)
 Frame = -3

Query: 206  SVAGRIQTVVGDLATQGERFQALLSWRDPRATFLFVVLCLIAAVGFYAVPFQVVVALWVL 27
            SVAGRIQTVVGD+A+QGERFQALL WRDPRATFLFVV+CL AAVGFYAVP +VVVALW L
Sbjct: 933  SVAGRIQTVVGDMASQGERFQALLGWRDPRATFLFVVMCLFAAVGFYAVPIRVVVALWGL 992

Query: 26   YAFRPPKF 3
            Y  RPPKF
Sbjct: 993  YVMRPPKF 1000


>ref|XP_002533623.1| conserved hypothetical protein [Ricinus communis]
            gi|223526481|gb|EEF28752.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 892

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/68 (82%), Positives = 61/68 (89%)
 Frame = -3

Query: 206  SVAGRIQTVVGDLATQGERFQALLSWRDPRATFLFVVLCLIAAVGFYAVPFQVVVALWVL 27
            SVAGRIQTVVGD+ATQGER QALLSWRDPRATFLFV++CL AAVG YAVP +VVVALW L
Sbjct: 802  SVAGRIQTVVGDMATQGERVQALLSWRDPRATFLFVIMCLFAAVGCYAVPIRVVVALWGL 861

Query: 26   YAFRPPKF 3
            Y  RPP+F
Sbjct: 862  YMLRPPRF 869


>emb|CBI37224.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/68 (82%), Positives = 59/68 (86%)
 Frame = -3

Query: 206 SVAGRIQTVVGDLATQGERFQALLSWRDPRATFLFVVLCLIAAVGFYAVPFQVVVALWVL 27
           SVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLFV  CL AAVGFY VP + VVALW L
Sbjct: 779 SVAGRIQTVVGDMASQGERFQALLSWRDPRATFLFVNFCLFAAVGFYLVPTKAVVALWGL 838

Query: 26  YAFRPPKF 3
           Y  RPPKF
Sbjct: 839 YVLRPPKF 846


>ref|XP_002268191.1| PREDICTED: uncharacterized protein LOC100246307 [Vitis vinifera]
          Length = 1012

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/68 (82%), Positives = 59/68 (86%)
 Frame = -3

Query: 206  SVAGRIQTVVGDLATQGERFQALLSWRDPRATFLFVVLCLIAAVGFYAVPFQVVVALWVL 27
            SVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLFV  CL AAVGFY VP + VVALW L
Sbjct: 922  SVAGRIQTVVGDMASQGERFQALLSWRDPRATFLFVNFCLFAAVGFYLVPTKAVVALWGL 981

Query: 26   YAFRPPKF 3
            Y  RPPKF
Sbjct: 982  YVLRPPKF 989


>emb|CAN83208.1| hypothetical protein VITISV_009141 [Vitis vinifera]
          Length = 1012

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/68 (82%), Positives = 59/68 (86%)
 Frame = -3

Query: 206  SVAGRIQTVVGDLATQGERFQALLSWRDPRATFLFVVLCLIAAVGFYAVPFQVVVALWVL 27
            SVAGRIQTVVGD+A+QGERFQALLSWRDPRATFLFV  CL AAVGFY VP + VVALW L
Sbjct: 922  SVAGRIQTVVGDMASQGERFQALLSWRDPRATFLFVNFCLFAAVGFYLVPTKAVVALWGL 981

Query: 26   YAFRPPKF 3
            Y  RPPKF
Sbjct: 982  YVLRPPKF 989


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