BLASTX nr result

ID: Coptis25_contig00033150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033150
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569681.1| PREDICTED: probable auxin efflux carrier com...   145   3e-33
ref|XP_003569680.1| PREDICTED: probable auxin efflux carrier com...   145   3e-33
gb|AAQ14257.1|AF247004_1 auxin efflux carrier [Momordica charantia]   135   3e-30
emb|CBX25245.1| hypothetical_protein [Oryza brachyantha]              132   3e-29
dbj|BAH47609.1| auxin:hydrogen symporter/transporter [Zinnia vio...   130   9e-29

>ref|XP_003569681.1| PREDICTED: probable auxin efflux carrier component 1b-like isoform
           2 [Brachypodium distachyon]
          Length = 310

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/136 (57%), Positives = 92/136 (67%), Gaps = 29/136 (21%)
 Frame = +3

Query: 24  MISLIDVYHVVEAIIPLYVAMILAYTSVKCWKLFTPDQCSGINMFVSKFSVPLLSFRVIS 203
           MIS I +YHV+EA +PLYVAMILAY S+K WKLFTP+QCSGIN FV+KFS+PLLSF+VIS
Sbjct: 1   MISWIAIYHVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60

Query: 204 GNNPSRVNL-----------------------------DCVITTFALSTLPNTLIVGIPI 296
            NNP  +NL                             D +IT F+LSTLPNTLIVGIP+
Sbjct: 61  TNNPYDMNLKLILADILQKLLALLGFAAISRACCAEKFDWLITGFSLSTLPNTLIVGIPL 120

Query: 297 LKSMYGSEAAELLAQI 344
           LK MYG EA  L++QI
Sbjct: 121 LKGMYGDEALNLISQI 136


>ref|XP_003569680.1| PREDICTED: probable auxin efflux carrier component 1b-like isoform
           1 [Brachypodium distachyon]
          Length = 362

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/136 (57%), Positives = 92/136 (67%), Gaps = 29/136 (21%)
 Frame = +3

Query: 24  MISLIDVYHVVEAIIPLYVAMILAYTSVKCWKLFTPDQCSGINMFVSKFSVPLLSFRVIS 203
           MIS I +YHV+EA +PLYVAMILAY S+K WKLFTP+QCSGIN FV+KFS+PLLSF+VIS
Sbjct: 1   MISWIAIYHVLEATVPLYVAMILAYLSIKWWKLFTPEQCSGINKFVAKFSIPLLSFQVIS 60

Query: 204 GNNPSRVNL-----------------------------DCVITTFALSTLPNTLIVGIPI 296
            NNP  +NL                             D +IT F+LSTLPNTLIVGIP+
Sbjct: 61  TNNPYDMNLKLILADILQKLLALLGFAAISRACCAEKFDWLITGFSLSTLPNTLIVGIPL 120

Query: 297 LKSMYGSEAAELLAQI 344
           LK MYG EA  L++QI
Sbjct: 121 LKGMYGDEALNLISQI 136


>gb|AAQ14257.1|AF247004_1 auxin efflux carrier [Momordica charantia]
          Length = 607

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/136 (52%), Positives = 87/136 (63%), Gaps = 29/136 (21%)
 Frame = +3

Query: 24  MISLIDVYHVVEAIIPLYVAMILAYTSVKCWKLFTPDQCSGINMFVSKFSVPLLSFRVIS 203
           MISL+D YHV+ A++PLYVAMILAY SVK WK+FTPDQCSGIN FV+ F+VPLLSF  IS
Sbjct: 1   MISLLDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 204 GNNPSRVN-----------------------------LDCVITTFALSTLPNTLIVGIPI 296
            NNP  +N                             L+  IT F+LSTLPNTL++GIP+
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLAVLAVWSNISKRGCLEWTITLFSLSTLPNTLVMGIPL 120

Query: 297 LKSMYGSEAAELLAQI 344
           LK MYG  +  L+ QI
Sbjct: 121 LKGMYGEFSGSLMVQI 136


>emb|CBX25245.1| hypothetical_protein [Oryza brachyantha]
          Length = 542

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/136 (48%), Positives = 90/136 (66%), Gaps = 29/136 (21%)
 Frame = +3

Query: 24  MISLIDVYHVVEAIIPLYVAMILAYTSVKCWKLFTPDQCSGINMFVSKFSVPLLSFRVIS 203
           MI+++D+YHV+ A++PLYVAM LAY SV+ W++F+PDQCSGIN FV+ F+VPLLSF  IS
Sbjct: 1   MITVLDLYHVLTAVVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 204 GNNPSRVN-----------------------------LDCVITTFALSTLPNTLIVGIPI 296
            NNP  +N                             LD +IT F+LSTLPNTL++GIP+
Sbjct: 61  TNNPFAMNLRFLAADSLQKLIVLALLALWCRLSCRGSLDWLITLFSLSTLPNTLVMGIPL 120

Query: 297 LKSMYGSEAAELLAQI 344
           L+ MYG+++  L+ QI
Sbjct: 121 LRGMYGADSGSLMVQI 136


>dbj|BAH47609.1| auxin:hydrogen symporter/transporter [Zinnia violacea]
          Length = 582

 Score =  130 bits (328), Expect = 9e-29
 Identities = 70/136 (51%), Positives = 86/136 (63%), Gaps = 29/136 (21%)
 Frame = +3

Query: 24  MISLIDVYHVVEAIIPLYVAMILAYTSVKCWKLFTPDQCSGINMFVSKFSVPLLSFRVIS 203
           MI+  D+YHV+ A++PLYVAMILAY SVK WK+FTPDQCSGIN FV+ F+VPLLSF  IS
Sbjct: 1   MITSSDLYHVLTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 204 GNNPSRVN-----------------------------LDCVITTFALSTLPNTLIVGIPI 296
            NNP  +N                             L+  IT F+LSTLPNTL++GIP+
Sbjct: 61  TNNPYTMNTRFIAADTLQKLMVLVGLAFWSRLSPRGSLEWSITLFSLSTLPNTLVMGIPL 120

Query: 297 LKSMYGSEAAELLAQI 344
           LK MYG  +  L+ QI
Sbjct: 121 LKGMYGDFSGSLMVQI 136


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