BLASTX nr result

ID: Coptis25_contig00033134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033134
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303753.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
ref|XP_002299344.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Gly...   192   2e-47
ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin respon...   192   3e-47
ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cuc...   192   3e-47

>ref|XP_002303753.1| predicted protein [Populus trichocarpa] gi|222841185|gb|EEE78732.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/135 (69%), Positives = 109/135 (80%)
 Frame = -2

Query: 421 EVFVQVTLLPDTEKMKEVLPSGFFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEE 242
           EVF QV LLP+T++  E++     P LP R +V SF K++TASDTSTHGGFSVL+RHA+E
Sbjct: 65  EVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHADE 124

Query: 241 CFPPLNMTQNPPAQELVAKDLHGFEWRFRHIYRGAPRRHLLSSGWSTFVSAKKIAAGDTF 62
           C PPL+M+  PP QELVAKDLHG EWRFRHI+RG PRRHLL SGWS FVSAKK+ AGD F
Sbjct: 125 CLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAF 184

Query: 61  IFLRGENEDYRVGVR 17
           IFLRGE E+ RVGVR
Sbjct: 185 IFLRGETEELRVGVR 199


>ref|XP_002299344.1| predicted protein [Populus trichocarpa] gi|222846602|gb|EEE84149.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  194 bits (492), Expect = 8e-48
 Identities = 94/135 (69%), Positives = 107/135 (79%)
 Frame = -2

Query: 421 EVFVQVTLLPDTEKMKEVLPSGFFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEE 242
           EVF QV LLP  E+  +++     P  P R +V SF K++TASDTSTHGGFSVLRRHA+E
Sbjct: 76  EVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTSTHGGFSVLRRHADE 135

Query: 241 CFPPLNMTQNPPAQELVAKDLHGFEWRFRHIYRGAPRRHLLSSGWSTFVSAKKIAAGDTF 62
           C PPL+M+  PPAQELVAKDLHG EWRFRHI+RG PRRHLL SGWS FVSAKK+ AGD F
Sbjct: 136 CLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDAF 195

Query: 61  IFLRGENEDYRVGVR 17
           IFLRGE E+ RVGVR
Sbjct: 196 IFLRGETEELRVGVR 210


>ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/135 (68%), Positives = 106/135 (78%)
 Frame = -2

Query: 421 EVFVQVTLLPDTEKMKEVLPSGFFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEE 242
           EVF QVTLLP+  + +  +     P+ P R  V SF K +TASDTSTHGGFSVLRRHA+E
Sbjct: 125 EVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADE 184

Query: 241 CFPPLNMTQNPPAQELVAKDLHGFEWRFRHIYRGAPRRHLLSSGWSTFVSAKKIAAGDTF 62
           C PPL+MT+ PP QELVAKDLHG EWRFRHI+RG PRRHLL SGWS FVS+K++ AGD F
Sbjct: 185 CLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAF 244

Query: 61  IFLRGENEDYRVGVR 17
           IFLRGEN + RVGVR
Sbjct: 245 IFLRGENGELRVGVR 259


>ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 669

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/137 (65%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
 Frame = -2

Query: 421 EVFVQVTLLPDTEKMKEVLPSGFFPSLPQ--RTKVSSFSKIVTASDTSTHGGFSVLRRHA 248
           EV+ Q+TL+P+     + LPS F P L +  +TKV SF K++TASDTSTHGGFSVLR+HA
Sbjct: 69  EVYAQITLMPEAN---QALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHA 125

Query: 247 EECFPPLNMTQNPPAQELVAKDLHGFEWRFRHIYRGAPRRHLLSSGWSTFVSAKKIAAGD 68
            EC PPL+MTQ  P QELVAKDLHG+EWRF+HI+RG PRRHLL++GWSTFV++K++ AGD
Sbjct: 126 TECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD 185

Query: 67  TFIFLRGENEDYRVGVR 17
           +F+FLRGEN + RVGVR
Sbjct: 186 SFVFLRGENGELRVGVR 202


>ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 641

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/137 (65%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
 Frame = -2

Query: 421 EVFVQVTLLPDTEKMKEVLPSGFFPSLPQ--RTKVSSFSKIVTASDTSTHGGFSVLRRHA 248
           EV+ Q+TL+P+     + LPS F P L +  +TKV SF K++TASDTSTHGGFSVLR+HA
Sbjct: 41  EVYAQITLMPEAN---QALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHA 97

Query: 247 EECFPPLNMTQNPPAQELVAKDLHGFEWRFRHIYRGAPRRHLLSSGWSTFVSAKKIAAGD 68
            EC PPL+MTQ  P QELVAKDLHG+EWRF+HI+RG PRRHLL++GWSTFV++K++ AGD
Sbjct: 98  TECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD 157

Query: 67  TFIFLRGENEDYRVGVR 17
           +F+FLRGEN + RVGVR
Sbjct: 158 SFVFLRGENGELRVGVR 174


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