BLASTX nr result

ID: Coptis25_contig00033133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033133
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]   125   3e-27
emb|CBI32840.3| unnamed protein product [Vitis vinifera]              125   5e-27
ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246...   125   5e-27
ref|XP_002525693.1| conserved hypothetical protein [Ricinus comm...   118   4e-25
ref|XP_004149117.1| PREDICTED: uncharacterized protein LOC101221...   114   6e-24

>emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]
          Length = 317

 Score =  125 bits (315), Expect = 3e-27
 Identities = 74/147 (50%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439 NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXGYWIVRKYIISEDGSVDDGIAYFVKWAV 260
           N+ILVNFGLSE+M+NPVS              GYWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 56  NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 115

Query: 259 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWLNEMSRIRSPW-LRAK 83
           R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 116 RLIATTFILQSTLDTPLALGALVSCWXIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 172

Query: 82  QVSAVRKNAEFLSRSAGKYSGMTPRSS 2
           + +A    AEFLSRS       TP  S
Sbjct: 173 EATAKHNRAEFLSRSGKTIPRGTPWDS 199


>emb|CBI32840.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  125 bits (313), Expect = 5e-27
 Identities = 74/147 (50%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439 NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXGYWIVRKYIISEDGSVDDGIAYFVKWAV 260
           N+ILVNFGLSE+M+NPVS              GYWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 241 NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 300

Query: 259 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWLNEMSRIRSPW-LRAK 83
           R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 301 RLIATTFILQSTLDTPLALGALVSCWVIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 357

Query: 82  QVSAVRKNAEFLSRSAGKYSGMTPRSS 2
           + +A    AEFLSRS       TP  S
Sbjct: 358 EATAKHNRAEFLSRSGKTIPRGTPWDS 384


>ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246460 [Vitis vinifera]
          Length = 537

 Score =  125 bits (313), Expect = 5e-27
 Identities = 74/147 (50%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = -3

Query: 439 NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXGYWIVRKYIISEDGSVDDGIAYFVKWAV 260
           N+ILVNFGLSE+M+NPVS              GYWIVRK++ISEDGSVD G+A FVKW +
Sbjct: 276 NTILVNFGLSEEMHNPVSIFALVGLILAGAALGYWIVRKFVISEDGSVDVGVAQFVKWGM 335

Query: 259 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWLNEMSRIRSPW-LRAK 83
           R++  T IL STLDTPLA+ AL SCW I   I S  +    VY   + S  RSPW  +++
Sbjct: 336 RLIATTFILQSTLDTPLALGALVSCWVIWILITSP-KWRRRVY--KKYSENRSPWGWKSR 392

Query: 82  QVSAVRKNAEFLSRSAGKYSGMTPRSS 2
           + +A    AEFLSRS       TP  S
Sbjct: 393 EATAKHNRAEFLSRSGKTIPRGTPWDS 419


>ref|XP_002525693.1| conserved hypothetical protein [Ricinus communis]
           gi|223534993|gb|EEF36676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score =  118 bits (296), Expect = 4e-25
 Identities = 69/141 (48%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = -3

Query: 439 NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXGYWIVRKYIISEDGSVDDGIAYFVKWAV 260
           NSIL+NFGLSE+M+NPV               GYWIVRK++IS+DGSVD GIA FVKWA+
Sbjct: 252 NSILINFGLSEEMHNPVYVFVVVGIVLAGAALGYWIVRKFVISKDGSVDVGIAQFVKWAM 311

Query: 259 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWLNEMSRIRSPWL-RAK 83
           RIV  T I  STLD  LA++   S + +C  IN + R + +       SR  SPWL + +
Sbjct: 312 RIVAATLIFQSTLDILLALITFQSLYVVCFLINGLTRRNQV---YQSHSRGGSPWLQQGR 368

Query: 82  QVSAVRKNAEFLSRSAGKYSG 20
           QV+A     EFLSRS    SG
Sbjct: 369 QVTAKHNRTEFLSRSGKMSSG 389


>ref|XP_004149117.1| PREDICTED: uncharacterized protein LOC101221567 [Cucumis sativus]
          Length = 497

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
 Frame = -3

Query: 439 NSILVNFGLSEDMYNPVSXXXXXXXXXXXXXXGYWIVRKYIISEDGSVDDGIAYFVKWAV 260
           NSIL++FGL E+M+NPV+              G+WIVRK++IS+DG+VD G+A FVKWA+
Sbjct: 242 NSILLSFGLKEEMHNPVAIFLLLGIILSGAALGFWIVRKFVISDDGNVDIGVAQFVKWAM 301

Query: 259 RIVGLTSILLSTLDTPLAILALASCWGICSFINSMFRGSALVYWLNEMSRIRSPWLRA-K 83
           RI+G T I  ST D PLA+ A   CW  C  I+S+    ++       +R  SPW +  K
Sbjct: 302 RIIGATFIFQSTPDAPLALGAFVCCWAACYLISSLKHRGSIFVRNQSYTRSGSPWKQQNK 361

Query: 82  QVSAVRKNAEFLSRSA 35
           ++   R + EFLSRS+
Sbjct: 362 KIVGKRIHPEFLSRSS 377


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