BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033129
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254...    80   1e-13
tpg|DAA42840.1| TPA: hypothetical protein ZEAMMB73_571212 [Zea m...    62   6e-08
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ...    60   1e-07
gb|AFW89859.1| hypothetical protein ZEAMMB73_951067 [Zea mays]         60   2e-07
emb|CBI31378.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
          Length = 1395

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = -2

Query: 332 SEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNAC 153
           SE EV  L+SQID+L++ELK KE+L E V++ + ++Q  DL N    LE+QL   +D AC
Sbjct: 585 SESEVTKLKSQIDRLEEELKQKEILVEEVTANNFQLQCTDLNNKCTDLELQLQIFKDKAC 644

Query: 152 HLEDELRDRQVELEERRMEIISLKQELNVHREK-ETVTEL 36
           HL+ EL +   + EE+ +EI +L+ +L  ++E+ ET T L
Sbjct: 645 HLDSELYNCHTKAEEQEIEIAALQLQLKFYQEETETKTHL 684


>tpg|DAA42840.1| TPA: hypothetical protein ZEAMMB73_571212 [Zea mays]
           gi|414864284|tpg|DAA42841.1| TPA: hypothetical protein
           ZEAMMB73_571212 [Zea mays]
          Length = 1351

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/91 (35%), Positives = 55/91 (60%)
 Frame = -2

Query: 341 ATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQLHSSQD 162
           +  +E + + L S+I QL++EL+NKEMLR+   S        +LQ     LE++L + + 
Sbjct: 559 SNNNELQFEKLTSRIRQLEEELRNKEMLRDDSFSESSTSNADELQRKCADLELKLLNFRS 618

Query: 161 NACHLEDELRDRQVELEERRMEIISLKQELN 69
             C LE++ +  Q ELE+R +E+  L+++LN
Sbjct: 619 QTCELEEKFQKSQEELEQRNLELSELRRKLN 649


>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1362

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/98 (35%), Positives = 54/98 (55%)
 Frame = -2

Query: 332 SEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQLHSSQDNAC 153
           SE EV  + S    L++EL  KEM  E +S+  L++Q  DL+     LE+ L   +D   
Sbjct: 540 SESEVSKMISLKGMLEEELNKKEMFIEQLSTDHLKIQCTDLEKKCADLELHLQDFKDKTS 599

Query: 152 HLEDELRDRQVELEERRMEIISLKQELNVHREKETVTE 39
           +L+ EL       EE+ +EI +L+Q+L   + KET T+
Sbjct: 600 YLDGELSIYHARAEEQGIEITALRQQLESFQGKETETK 637


>gb|AFW89859.1| hypothetical protein ZEAMMB73_951067 [Zea mays]
          Length = 1072

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
 Frame = -2

Query: 341 ATGSEPEVDSLRSQIDQLKQELKNKEMLREGVSSTDLEVQLIDLQNMIGCLEVQLHSSQD 162
           A  +E +   L S+I QL+++L+NKEMLR+   S        ++Q     LE+++ + + 
Sbjct: 261 ANNNELQFKKLTSRIHQLEEDLRNKEMLRDDSFSESSMSNADEIQRKCADLELKVLNFRS 320

Query: 161 NACHLEDELRDRQVELEERRMEIISLKQELNVHREKE--------------TVTELQHTL 24
             C LE++ R  Q ELE+R +E+ +L++++N     E               + +L+ T 
Sbjct: 321 QTCELEEKFRKCQEELEQRNLELSALRRKINGLHSNELEVCESGATWKYQARIADLEDTE 380

Query: 23  PET 15
           PET
Sbjct: 381 PET 383


>emb|CBI31378.3| unnamed protein product [Vitis vinifera]
          Length = 1338

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/70 (37%), Positives = 44/70 (62%)
 Frame = -2

Query: 248 VSSTDLEVQLIDLQNMIGCLEVQLHSSQDNACHLEDELRDRQVELEERRMEIISLKQELN 69
           V++ + ++Q  DL N    LE+QL   +D ACHL+ EL +   + EE+ +EI +L+ +LN
Sbjct: 526 VTANNFQLQCTDLNNKCTDLELQLQIFKDKACHLDSELYNCHTKAEEQEIEIAALQLQLN 585

Query: 68  VHREKETVTE 39
            H+E   +T+
Sbjct: 586 QHQEATLITQ 595