BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033120
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22750.3| unnamed protein product [Vitis vinifera]               86   1e-14
ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002510793.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
ref|XP_002865906.1| hypothetical protein ARALYDRAFT_918272 [Arab...    57   5e-06
ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana] ...    57   5e-06

>emb|CBI22750.3| unnamed protein product [Vitis vinifera]
          Length = 1591

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 26/260 (10%)
 Frame = -1

Query: 728  DGNLKASSSAHHSQ--PNQARSFCNSRDASDQIDGFDFSL--NDKLLYQGRCPNTSMMDN 561
            DG   +SSS ++    P Q       ++ S      D  +    ++LY+ + P  S+ D 
Sbjct: 1224 DGIKHSSSSLNNKWFGPKQGLEMATMKNPSTLFKPNDSQVLKGSEMLYEVKKPGLSLNDK 1283

Query: 560  LAKKTRNGINRSENGYNGXXXXXXXXXXXXXDFCIEENSLLRR---------------LE 426
            L  + R     + + +N                 + ++ L+                 LE
Sbjct: 1284 LLGERRGSDAATRDWHNNNNPEDLHNDFKGEVIDLNDSFLIGEDFSSIAKSSRFSPLVLE 1343

Query: 425  KRKNPVVGSSSSARRLSFGTDKYPDFPSIEEINSG--IWNCLKNQNRKF-TGNFDLTNID 255
              ++P  G S ++RRLSF    +P FP+  EINS   IW  LK+Q +    G  +  + +
Sbjct: 1344 LEEDPAAGKSKTSRRLSFSNSSHPTFPTAAEINSNSDIWTTLKDQKQSLGKGIVEFEDTE 1403

Query: 254  SDKEDMLPLKTRGEPLMEKTTQRSKSN----SLRQNVTRPYGIMPSSEVTHSPGLQQQSP 87
              K D LP+K + + L+E +  RS  +    S ++  T  Y   P S   +S  LQQ SP
Sbjct: 1404 FGKGD-LPMKHQKQ-LLEGSMHRSAKDFCGPSFQEKDTH-YSGTPLSNALNSVHLQQGSP 1460

Query: 86   WTTEFLNKVKEKSRMHQEAL 27
            WT EFLN+V+EKS++ Q++L
Sbjct: 1461 WTIEFLNRVREKSKLRQQSL 1480


>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
            predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
 Frame = -1

Query: 398  SSSARRLSFGTDKYPDFPSIEEINS--GIWNCLKNQNRKFTGNFDLTNIDSDKEDMLPLK 225
            S +ARRLSFG + +P+ P+  E NS   +W  +++  ++   N     ID DK + +P+K
Sbjct: 1098 SKAARRLSFGKNSHPNNPTAAEKNSCPDLWTPIESDRQRLPQNRGDPIID-DKHEKVPVK 1156

Query: 224  TRGEPLMEKTTQRSKSNSLR----QNVTRPYGI-MPSSEVTHSPGLQQQSPWTTEFLNKV 60
             R   L E  T R+   S R    + ++   G   P S+  HS   Q  SPWT EFLN+V
Sbjct: 1157 PRKNLLEEAFTLRAAGKSTRFPFEEEISHCGGSGTPLSKAIHSAHPQPGSPWTIEFLNRV 1216

Query: 59   KEKSRMHQEAL 27
            +EKSR+ Q++L
Sbjct: 1217 REKSRLRQQSL 1227


>ref|XP_002510793.1| conserved hypothetical protein [Ricinus communis]
            gi|223549908|gb|EEF51395.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1318

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = -1

Query: 398  SSSARRLSFGTDKYPDFPSIEEINSGIWNCLKNQNRKFTGNFDLTNIDSDKEDMLPLKTR 219
            S +AR+LSFG +++P FP+   INS   + L++       +    N  SD +  +PLK  
Sbjct: 1100 SKAARKLSFGRNRHPTFPTAAAINSN--SELRSSENDHGHSLQQNNDYSDCD--MPLKRP 1155

Query: 218  GE----PLMEKTTQRSKSNSLRQNVTRPYGIMPSSEVTHSPGLQQQSPWTTEFLNKVKEK 51
             E     L + +T+ +K+   R+ ++  +G  P S+  HS   Q  SPWT EFLN+++EK
Sbjct: 1156 KEIVKDVLRQGSTRNAKALPFREEMSH-FGGTPLSKAIHSANPQPGSPWTIEFLNRIREK 1214

Query: 50   SRMHQEAL 27
             R+ Q++L
Sbjct: 1215 GRLPQQSL 1222


>ref|XP_002865906.1| hypothetical protein ARALYDRAFT_918272 [Arabidopsis lyrata subsp.
            lyrata] gi|297311741|gb|EFH42165.1| hypothetical protein
            ARALYDRAFT_918272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1581

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
 Frame = -1

Query: 398  SSSARRLSFGTDKYPDFPSIEEINSGIWNCLKNQNRKFTGNFDLTNIDSDKEDMLPLKTR 219
            S SAR+LSF     P+FP   EI+         ++ K+  N  L        D  P K +
Sbjct: 1363 SKSARKLSFFGSLQPNFPKAAEIDLSSERFTTEKDSKYDNNASLRGY----ADNYPAKRQ 1418

Query: 218  GEPLMEKTTQRSKSNS----LRQNVTRPYGIMPSSEVTHSPGLQQQSPWTTEFLNKVKEK 51
               L E  T+RS   +     R+ ++  +G  P S    S    Q SPWT +FLN+V+E+
Sbjct: 1419 RTLLEEVLTRRSAVPTTELPFREEISH-FGGSPLSNAIRSSNQVQSSPWTVDFLNRVRER 1477

Query: 50   SRMHQE 33
            SR  ++
Sbjct: 1478 SRARKQ 1483


>ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana]
            gi|332008813|gb|AED96196.1| shortage in chiasmata 1
            [Arabidopsis thaliana]
          Length = 1594

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
 Frame = -1

Query: 398  SSSARRLSFGTDKYPDFPSIEEINSGIWNCLKNQNRKFTGNFDLTNIDSDKEDMLPLKTR 219
            S S+R+LSF     P+FP   +I+S        ++ K+  N  L        D  P K +
Sbjct: 1377 SKSSRKLSFFGSLQPNFPKAADIDSSSERYATEKDSKYDNNTSLRGY----ADNYPAKRQ 1432

Query: 218  GEPLMEKTTQRSKSNS----LRQNVTRPYGIMPSSEVTHSPGLQQQSPWTTEFLNKVKEK 51
               L E  T+RS   +     R+ ++  +G  P S    S    Q SPWT +FLN+V+E+
Sbjct: 1433 RTLLEEVLTRRSAVPTTELPFREEISH-FGGSPLSNAIRSSNQVQSSPWTVDFLNRVRER 1491

Query: 50   SRMHQE 33
            SR  ++
Sbjct: 1492 SRARKQ 1497