BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033087
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002517612.1| pentatricopeptide repeat-containing protein,...   124   8e-27
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]                         119   3e-25

>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
            [Vitis vinifera]
          Length = 879

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/112 (50%), Positives = 78/112 (69%)
 Frame = -1

Query: 337  NGFTNTIANVVSMEEHMLQANGKFLVLDIFKQMLVDRWDPRTAAYNAILTCLCQHSMLKA 158
            NGF+      +S + +  Q N + + L+ F +M+ D W PR+AAYN+IL CLCQ+ M + 
Sbjct: 667  NGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRT 726

Query: 157  AFELRDKVMGKGFVPDSVTFAALLHGICLEGRSGEWKKFFHCNLNKQELQVA 2
            A +L +K+  KG +PDSV+F ALLHG+CLEGRS EWK    CNLN++ELQ+A
Sbjct: 727  ALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIA 778


>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 794

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/112 (53%), Positives = 75/112 (66%)
 Frame = -1

Query: 337 NGFTNTIANVVSMEEHMLQANGKFLVLDIFKQMLVDRWDPRTAAYNAILTCLCQHSMLKA 158
           NG TN +  V+S +      N   LVL+ F  M+ D WD R A+YN+IL CLCQH M+K 
Sbjct: 635 NGLTNNVDFVISNQRSEQTENS--LVLESFGMMISDGWDRRAASYNSILICLCQHKMVKH 692

Query: 157 AFELRDKVMGKGFVPDSVTFAALLHGICLEGRSGEWKKFFHCNLNKQELQVA 2
           A  LRDK+M KGF+PD V+  ALLHG+CLEGRS +W     C LN++ELQVA
Sbjct: 693 ALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVA 744


>ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|222833859|gb|EEE72336.1|
            predicted protein [Populus trichocarpa]
          Length = 826

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/112 (50%), Positives = 76/112 (67%)
 Frame = -1

Query: 337  NGFTNTIANVVSMEEHMLQANGKFLVLDIFKQMLVDRWDPRTAAYNAILTCLCQHSMLKA 158
            NG TN +A  VS + +        L++D F+ M+ D W+ R AAYN++L CLC H M+ A
Sbjct: 668  NGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNA 727

Query: 157  AFELRDKVMGKGFVPDSVTFAALLHGICLEGRSGEWKKFFHCNLNKQELQVA 2
            A +LRDK+ GKG  PD V+FAAL++G+CLEGRS EWK    C LN+ ELQ+A
Sbjct: 728  ALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIA 779


>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
            [Cucumis sativus] gi|449484425|ref|XP_004156880.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/112 (50%), Positives = 74/112 (66%)
 Frame = -1

Query: 337  NGFTNTIANVVSMEEHMLQANGKFLVLDIFKQMLVDRWDPRTAAYNAILTCLCQHSMLKA 158
            NGFTNT A  VS E + L  N + +  D F +M+ D W  + AAYN IL CLCQ  M+K 
Sbjct: 671  NGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKT 730

Query: 157  AFELRDKVMGKGFVPDSVTFAALLHGICLEGRSGEWKKFFHCNLNKQELQVA 2
            A +LR+K++  G   D+V+F AL+HGICLEG S EW+    C+LN+ ELQ+A
Sbjct: 731  ALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIA 782


>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/112 (50%), Positives = 72/112 (64%)
 Frame = -1

Query: 337 NGFTNTIANVVSMEEHMLQANGKFLVLDIFKQMLVDRWDPRTAAYNAILTCLCQHSMLKA 158
           NG TN     +S +    Q N   L L+ F  M+ D WD R AAYN+IL CLCQH M+K 
Sbjct: 665 NGLTNNNGIAISSKRSNSQPN---LTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKP 721

Query: 157 AFELRDKVMGKGFVPDSVTFAALLHGICLEGRSGEWKKFFHCNLNKQELQVA 2
           A +L DK+M KGF PD V+F ALLHG+CLEGR  +W     CN N+++LQ+A
Sbjct: 722 ALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIA 773